Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC3O15379 UBE2FP3-201ENST00000436366 524 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 RSU1P2-202ENST00000437884 485 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 MTCO1P27-201ENST00000448269 226 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.73□□□□□ -1.97
HDAC3O15379 snoU13.22-201ENST00000459428 104 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HDAC3O15379 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC3O15379 AC090453.1-201ENST00000495560 436 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC010625.1-201ENST00000511296 403 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC093677.1-201ENST00000514414 678 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC3O15379 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
HDAC3O15379 AC106038.2-201ENST00000520706 568 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 PSMA2P1-201ENST00000526365 646 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC3O15379 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC3O15379 AC012414.6-201ENST00000568241 401 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 RSL24D1P11-201ENST00000591045 491 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.73□□□□□ -1.97
HDAC3O15379 BNIP3P22-201ENST00000593399 556 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC119751.7-201ENST00000600494 245 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 AL137843.1-201ENST00000605078 385 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AL031775.1-201ENST00000607014 887 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.73□□□□□ -1.97
HDAC3O15379 AL513477.2-201ENST00000607858 568 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC107214.2-201ENST00000608204 634 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC096577.2-201ENST00000611455 153 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC011939.3-201ENST00000613686 466 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AL355810.1-201ENST00000614629 552 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AL158063.1-201ENST00000615349 536 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 MIR3651-201ENST00000630427 90 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 AC135776.4-201ENST00000624300 1904 ntBASIC2.73□□□□□ -1.97
HDAC3O15379 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HDAC3O15379 MAPK10-266ENST00000641066 6555 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 GDI2P1-201ENST00000429312 1336 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 PABPC1P9-201ENST00000426076 1612 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 RNU6-462P-201ENST00000362659 105 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 Y_RNA.97-201ENST00000363094 102 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.72□□□□□ -1.97
HDAC3O15379 Y_RNA.548-201ENST00000384656 105 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 SNORD116-4-201ENST00000384733 96 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
HDAC3O15379 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.72□□□□□ -1.97
HDAC3O15379 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HDAC3O15379 RNA5SP120-201ENST00000410900 112 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AL445669.1-201ENST00000426743 755 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC3O15379 PSMA6P3-201ENST00000428242 164 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 AC098826.1-201ENST00000433943 471 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 MTCYBP45-201ENST00000435243 565 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 MTCYBP39-201ENST00000437562 491 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 MTND4P6-201ENST00000438297 472 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC3O15379 AC093156.1-201ENST00000440382 670 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 MTCO2P7-201ENST00000446518 666 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AC002381.1-201ENST00000447049 280 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC3O15379 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 NUP58P1-201ENST00000502546 1738 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 MTND5P4-201ENST00000514978 288 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 COX6CP8-201ENST00000522620 226 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 HSPA8P13-201ENST00000523715 472 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HDAC3O15379 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC3O15379 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.72□□□□□ -1.97
HDAC3O15379 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC3O15379 AC103710.4-201ENST00000609301 899 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 MIR7844-201ENST00000616161 122 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AL445264.1-201ENST00000621719 171 ntBASIC2.72□□□□□ -1.97
HDAC3O15379 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC3O15379 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.72□□□□□ -1.97
HDAC3O15379 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
HDAC3O15379 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
HDAC3O15379 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC3O15379 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC3O15379 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC3O15379 U3.4-201ENST00000363352 213 ntBASIC2.71□□□□□ -1.98
HDAC3O15379 Y_RNA.333-201ENST00000365274 102 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms