Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 TRBV12-2-201ENST00000489763 344 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.13□□□□□ -1.75
PNKPQ96T60 AC135721.1-201ENST00000497954 479 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 RN7SKP83-201ENST00000516512 178 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 RNU6-64P-201ENST00000517119 105 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 SUMO2P20-201ENST00000520803 283 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 OR5BN1P-201ENST00000532955 829 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 CR383656.7-201ENST00000548164 174 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.13□□□□□ -1.75
PNKPQ96T60 MIR4795-201ENST00000584182 89 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AL669831.4-202ENST00000590817 238 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AC010591.1-201ENST00000603941 649 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.13□□□□□ -1.75
PNKPQ96T60 AC112200.1-201ENST00000625015 234 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.13□□□□□ -1.75
PNKPQ96T60 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PNKPQ96T60 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PNKPQ96T60 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.13□□□□□ -1.75
PNKPQ96T60 ASNSP3-201ENST00000451989 1306 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
PNKPQ96T60 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PNKPQ96T60 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PNKPQ96T60 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.12□□□□□ -1.75
PNKPQ96T60 HSPE1P11-201ENST00000339579 310 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PNKPQ96T60 SNORA62.1-201ENST00000364287 154 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 RNU6-641P-201ENST00000384006 107 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 MIR454-201ENST00000390180 115 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PNKPQ96T60 HLFP1-201ENST00000402375 499 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AL391417.1-201ENST00000404100 426 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AL356432.1-201ENST00000405809 419 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 RNU2-36P-201ENST00000410361 191 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 RNA5SP107-201ENST00000411358 122 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC007390.1-201ENST00000415722 356 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AL353678.1-201ENST00000422735 741 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC018630.2-202ENST00000422992 927 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 MED13P1-201ENST00000428342 171 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.12□□□□□ -1.75
PNKPQ96T60 TBCAP1-201ENST00000436520 327 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC083863.1-201ENST00000438811 231 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AL133547.1-201ENST00000448546 220 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC007967.1-201ENST00000455422 1159 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.12□□□□□ -1.75
PNKPQ96T60 RPS29P15-201ENST00000458329 171 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC126389.1-201ENST00000477436 290 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 NIPA2P2-201ENST00000496376 1083 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.12□□□□□ -1.75
PNKPQ96T60 AC004062.1-201ENST00000509926 645 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PNKPQ96T60 RNU2-10P-201ENST00000516375 211 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 RNU7-51P-201ENST00000516560 62 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 RN7SKP116-201ENST00000516902 319 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.12□□□□□ -1.75
PNKPQ96T60 FAM60DP-201ENST00000524174 632 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.12□□□□□ -1.75
PNKPQ96T60 OR5B10P-201ENST00000532869 642 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.12□□□□□ -1.75
PNKPQ96T60 AC125611.2-201ENST00000551907 647 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AL161713.1-201ENST00000555538 145 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 ANP32BP3-201ENST00000559213 706 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.12□□□□□ -1.75
PNKPQ96T60 AC010680.3-201ENST00000604215 520 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC013553.2-201ENST00000604244 589 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 MIR6075-201ENST00000620782 95 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 AC039056.2-201ENST00000622261 511 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PNKPQ96T60 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PNKPQ96T60 AL161912.2-201ENST00000565707 3007 ntBASIC4.12□□□□□ -1.75
PNKPQ96T60 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PNKPQ96T60 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PNKPQ96T60 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.11□□□□□ -1.75
PNKPQ96T60 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.11□□□□□ -1.75
PNKPQ96T60 ASNSP1-201ENST00000518311 1939 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.11□□□□□ -1.75
PNKPQ96T60 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PNKPQ96T60 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PNKPQ96T60 SNORA32.2-201ENST00000384049 122 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 RNU6-432P-201ENST00000384196 109 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 SNORA70E-201ENST00000384492 135 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 SNORD37.1-201ENST00000390968 65 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 MIR1250-201ENST00000408098 113 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 RNU6-1148P-201ENST00000410992 104 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 RPL35AP12-201ENST00000425362 338 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 RPL7P12-201ENST00000446719 750 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.11□□□□□ -1.75
PNKPQ96T60 MTND3P16-201ENST00000452205 344 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 RPL38P4-201ENST00000502376 214 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms