Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC004965.1-201ENST00000413033 213 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AL627224.1-201ENST00000448334 444 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 RPS29P23-201ENST00000458635 123 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 KLF3P2-201ENST00000465138 268 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 SCARNA17.1-201ENST00000516211 143 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 SCARNA17.2-201ENST00000516334 143 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 SNORA31.18-201ENST00000517043 134 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 SNORA31.25-201ENST00000517242 134 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 ARL2BPP2-201ENST00000550907 489 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC107954.1-201ENST00000565906 727 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC024619.4-201ENST00000580924 316 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 AC002487.1-201ENST00000604565 994 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 SCARNA17.4-201ENST00000614296 143 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 MIR7973-1-201ENST00000614683 76 ntBASIC1.03□□□□□ -2.24
GAFA1Q96PS6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
GAFA1Q96PS6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
GAFA1Q96PS6 AL391987.6-201ENST00000305671 199 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC068050.1-201ENST00000394891 380 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 FGF7P8-201ENST00000402994 292 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 FABP5P3-201ENST00000437960 408 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL121601.2-201ENST00000438019 707 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL603825.1-201ENST00000438481 80 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 RPL23AP16-201ENST00000441715 421 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL359385.1-201ENST00000456509 365 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 snoU13.7-201ENST00000459220 104 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 RPL36AP21-201ENST00000490372 323 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC016065.2-201ENST00000514530 444 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AP005902.1-201ENST00000521358 186 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC090821.2-201ENST00000523552 176 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC090666.1-201ENST00000578241 445 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC023043.2-201ENST00000589678 1026 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC040174.2-201ENST00000602701 465 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AC073413.2-201ENST00000604332 360 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL713998.2-201ENST00000604538 1198 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 snoU13.31-201ENST00000607291 104 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 AL355810.1-201ENST00000614629 552 ntBASIC1.02□□□□□ -2.25
GAFA1Q96PS6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
GAFA1Q96PS6 MTCO1P9-201ENST00000505577 1534 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 Y_RNA.595-201ENST00000410403 105 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AL133384.1-201ENST00000412744 351 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 Z82205.1-201ENST00000428456 297 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 USP12PX-201ENST00000432383 1057 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.01□□□□□ -2.25
GAFA1Q96PS6 MTCO1P42-201ENST00000457379 726 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AC107626.1-201ENST00000471084 183 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 RPS20P22-201ENST00000473700 357 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AC022447.3-201ENST00000506865 495 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.01□□□□□ -2.25
GAFA1Q96PS6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.01□□□□□ -2.25
GAFA1Q96PS6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AC087481.2-201ENST00000565492 330 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AP005137.2-201ENST00000609238 400 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AC005296.1-201ENST00000616145 209 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 AC003001.2-201ENST00000616294 831 ntBASIC1.01□□□□□ -2.25
GAFA1Q96PS6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
GAFA1Q96PS6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1□□□□□ -2.25
GAFA1Q96PS6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
GAFA1Q96PS6 SNORA23-201ENST00000365128 182 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 OR1L1-202ENST00000373686 1083 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 FCF1P2-201ENST00000415284 583 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 SEPT2P1-201ENST00000419651 180 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1□□□□□ -2.25
GAFA1Q96PS6 MTND5P25-201ENST00000430499 799 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 RPS6P15-201ENST00000431996 751 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 AC015922.2-201ENST00000435593 184 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 AP000949.1-201ENST00000438328 629 ntBASIC1□□□□□ -2.25
GAFA1Q96PS6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1□□□□□ -2.25
GAFA1Q96PS6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1□□□□□ -2.25
GAFA1Q96PS6 NAP1L1P3-201ENST00000462291 880 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms