Protein–RNA interactions for Protein: A0A087X0R7

SENP3-EIF4A1, SENP3-EIF4A1 readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1A0A087X0R7 RNU6ATAC-201ENST00000408749 126 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 FHP1-201ENST00000442741 703 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RPL23AP15-201ENST00000450202 459 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL353752.1-201ENST00000454946 260 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNA5SP103-201ENST00000459503 118 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNU6-111P-201ENST00000517179 105 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC060771.1-201ENST00000582031 164 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 IPO5P1-202ENST00000600039 287 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL591034.3-201ENST00000605511 685 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC103710.2-201ENST00000609912 942 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL138825.1-201ENST00000618587 192 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL357559.1-201ENST00000622228 274 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC011155.2-201ENST00000623202 216 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 SAMMSON-213ENST00000641336 1521 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC022031.1-201ENST00000585985 2593 ntBASIC6.07□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL359854.1-201ENST00000614203 1594 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 MTND5P6-201ENST00000422338 1798 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 Y_RNA.222-201ENST00000364264 102 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 PCMTD1P1-201ENST00000455560 355 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC108059.3-201ENST00000456388 214 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RPL23AP24-201ENST00000458203 385 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RPL21P126-201ENST00000470049 478 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 DEFB109F-201ENST00000491870 277 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC110768.1-201ENST00000509222 400 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 MTCO3P44-201ENST00000510977 541 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNA5SP446-201ENST00000515955 82 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNU2-10P-201ENST00000516375 211 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 Y_RNA.703-201ENST00000516846 111 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 SETP7-201ENST00000552169 453 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 VN1R84P-201ENST00000593697 235 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 SDR42E1P2-201ENST00000614861 481 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 SDR42E1P4-201ENST00000620894 481 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 MAPK10-304ENST00000641341 3984 ntBASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNU6-1207P-201ENST00000384343 107 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 MIR1271-201ENST00000408537 86 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNU4-46P-201ENST00000410818 138 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC016831.4-201ENST00000438302 307 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 HMGB3P21-201ENST00000452483 547 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 SCARNA10-201ENST00000459255 330 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL591473.1-201ENST00000464297 313 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RN7SL303P-201ENST00000469773 251 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 MIR3133-201ENST00000583157 78 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC005899.2-201ENST00000584353 90 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC010201.1-201ENST00000605051 540 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC245517.5-201ENST00000611529 162 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL356274.1-201ENST00000617064 410 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AP000542.2-201ENST00000623199 6179 ntBASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AL592182.3-201ENST00000642132 3304 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AC116158.1-201ENST00000560231 2129 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 AP001642.1-201ENST00000624727 2117 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 SNORD50B-201ENST00000364995 70 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNA5SP240-201ENST00000365355 128 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNU6-128P-201ENST00000383976 107 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNU6-886P-201ENST00000384319 105 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 Y_RNA.473-201ENST00000384333 102 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 Y_RNA.518-201ENST00000384552 113 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 RNU2-71P-201ENST00000411395 189 ntBASIC6.04□□□□□ -1.44
SENP3-EIF4A1A0A087X0R7 UBE2Q2P12-201ENST00000414573 204 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms