Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.66□□□□□ -1.66
EPHB3P54753 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 AC130650.2-201ENST00000618736 2403 ntBASIC4.66□□□□□ -1.66
EPHB3P54753 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.66□□□□□ -1.66
EPHB3P54753 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
EPHB3P54753 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EPHB3P54753 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.65□□□□□ -1.66
EPHB3P54753 NXPH1-205ENST00000602349 1953 ntBASIC4.65□□□□□ -1.66
EPHB3P54753 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.65□□□□□ -1.66
EPHB3P54753 AC139713.2-215ENST00000641428 5037 ntBASIC4.65□□□□□ -1.66
EPHB3P54753 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.65□□□□□ -1.66
EPHB3P54753 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
EPHB3P54753 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.65□□□□□ -1.66
EPHB3P54753 ZNF519P1-201ENST00000449011 1626 ntBASIC4.65□□□□□ -1.66
EPHB3P54753 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.65□□□□□ -1.66
EPHB3P54753 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
EPHB3P54753 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
EPHB3P54753 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
EPHB3P54753 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
EPHB3P54753 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
EPHB3P54753 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
EPHB3P54753 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.65□□□□□ -1.66
EPHB3P54753 AC244517.1-201ENST00000606030 2086 ntBASIC4.65□□□□□ -1.66
EPHB3P54753 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
EPHB3P54753 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
EPHB3P54753 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
EPHB3P54753 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
EPHB3P54753 SNORD3E-201ENST00000362899 217 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 RNU1-83P-201ENST00000363426 164 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 Y_RNA.307-201ENST00000365022 117 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
EPHB3P54753 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
EPHB3P54753 EIF4A1P3-201ENST00000411521 244 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.65□□□□□ -1.67
EPHB3P54753 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.65□□□□□ -1.67
EPHB3P54753 AL358176.3-201ENST00000420757 454 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AL031736.2-201ENST00000426573 787 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 RPL23AP25-201ENST00000430973 463 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 RPL36AP6-201ENST00000435770 321 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 RN7SL812P-201ENST00000493791 279 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AC005726.1-201ENST00000494679 427 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 RN7SKP40-201ENST00000517211 242 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.65□□□□□ -1.67
EPHB3P54753 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.65□□□□□ -1.67
EPHB3P54753 OR11H5P-201ENST00000554039 926 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.65□□□□□ -1.67
EPHB3P54753 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.65□□□□□ -1.67
EPHB3P54753 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.65□□□□□ -1.67
EPHB3P54753 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.65□□□□□ -1.67
EPHB3P54753 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
EPHB3P54753 BNIP3P16-201ENST00000589779 534 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.65□□□□□ -1.67
EPHB3P54753 AC092747.3-201ENST00000603769 301 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.65□□□□□ -1.67
EPHB3P54753 AC140479.6-201ENST00000633535 357 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.65□□□□□ -1.67
EPHB3P54753 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
EPHB3P54753 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
EPHB3P54753 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.65□□□□□ -1.67
EPHB3P54753 AL731532.2-201ENST00000623542 1953 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 MTND5P28-201ENST00000438005 1594 ntBASIC4.65□□□□□ -1.67
EPHB3P54753 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
EPHB3P54753 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EPHB3P54753 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EPHB3P54753 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
EPHB3P54753 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
EPHB3P54753 RNU6-179P-201ENST00000363350 107 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 RNU1-132P-201ENST00000364300 164 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.64□□□□□ -1.67
EPHB3P54753 RPL17P36-201ENST00000420302 549 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 RPL23AP38-201ENST00000423801 469 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 RAC1P6-201ENST00000423911 575 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.64□□□□□ -1.67
EPHB3P54753 AL132765.1-201ENST00000434165 553 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 CEACAMP1-201ENST00000434624 1035 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.64□□□□□ -1.67
EPHB3P54753 MTND2P29-201ENST00000438595 412 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.64□□□□□ -1.67
EPHB3P54753 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.64□□□□□ -1.67
EPHB3P54753 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.64□□□□□ -1.67
EPHB3P54753 RPL7P52-201ENST00000449200 742 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AP001992.1-205ENST00000462248 379 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.64□□□□□ -1.67
EPHB3P54753 SNORD116-26-201ENST00000516006 96 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 RNU6-1016P-201ENST00000516689 94 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 MIR2116-201ENST00000517221 80 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.64□□□□□ -1.67
EPHB3P54753 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.64□□□□□ -1.67
EPHB3P54753 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.64□□□□□ -1.67
EPHB3P54753 AP003730.1-201ENST00000524605 285 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.64□□□□□ -1.67
EPHB3P54753 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.64□□□□□ -1.67
EPHB3P54753 OR8R1P-201ENST00000543943 764 ntBASIC4.64□□□□□ -1.67
EPHB3P54753 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms