Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.8□□□□□ -1.96
HDAC3O15379 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
HDAC3O15379 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
HDAC3O15379 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HDAC3O15379 ZNF519P1-201ENST00000449011 1626 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AL359893.1-201ENST00000447628 1580 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 OR4G11P-202ENST00000642116 1414 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 RNU6-500P-201ENST00000362349 107 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 RNU6-777P-201ENST00000364265 104 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 RNU6-343P-201ENST00000364709 104 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 RNU6-1180P-201ENST00000364935 107 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 Y_RNA.302-201ENST00000364997 102 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AL139095.1-201ENST00000404326 391 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AL024474.1-201ENST00000404655 591 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AL133384.1-201ENST00000412744 351 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.8□□□□□ -1.96
HDAC3O15379 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.8□□□□□ -1.96
HDAC3O15379 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC019178.2-201ENST00000423595 505 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC005300.1-201ENST00000428401 373 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.8□□□□□ -1.96
HDAC3O15379 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 AL590664.1-201ENST00000448065 339 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC009961.3-201ENST00000449832 765 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC026410.2-201ENST00000460281 156 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC080014.1-201ENST00000496877 1201 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.8□□□□□ -1.96
HDAC3O15379 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 RNU6-150P-201ENST00000516237 95 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC092470.1-201ENST00000546187 132 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC107016.2-201ENST00000547968 190 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 LSM6P2-201ENST00000552208 177 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 MIR5680-201ENST00000577577 84 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 MIR3944-201ENST00000581277 108 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 MIR4637-201ENST00000582405 84 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.8□□□□□ -1.96
HDAC3O15379 WISP1-OT1-201ENST00000602893 642 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 SRGNP1-201ENST00000603392 451 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC105129.3-201ENST00000605455 485 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 AC135507.1-201ENST00000607214 561 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.8□□□□□ -1.96
HDAC3O15379 AC009318.4-201ENST00000620496 486 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 FO624990.1-201ENST00000636373 85 ntBASIC2.8□□□□□ -1.96
HDAC3O15379 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.8□□□□□ -1.96
HDAC3O15379 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.8□□□□□ -1.96
HDAC3O15379 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.8□□□□□ -1.96
HDAC3O15379 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HDAC3O15379 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HDAC3O15379 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HDAC3O15379 AL445523.1-201ENST00000451184 1362 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 RPL21P132-201ENST00000331267 462 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 MIR208A-201ENST00000362287 71 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 SNORD46.1-201ENST00000364139 104 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 Y_RNA.436-201ENST00000384097 102 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 RNU6-253P-201ENST00000384730 105 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 RNVU1-14-201ENST00000384770 164 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 U3.19-201ENST00000390893 196 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 BTF3L4P1-201ENST00000413813 468 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.79□□□□□ -1.96
HDAC3O15379 AL096701.2-201ENST00000416920 238 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 SEPT2P1-201ENST00000419651 180 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 RPL7P30-201ENST00000420888 709 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 UBE2D3P2-201ENST00000424409 445 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.79□□□□□ -1.96
HDAC3O15379 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.79□□□□□ -1.96
HDAC3O15379 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.79□□□□□ -1.96
HDAC3O15379 MTCO2P16-201ENST00000436962 677 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.79□□□□□ -1.96
HDAC3O15379 TAF9P1-201ENST00000445421 515 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 MTND2P19-201ENST00000449129 1012 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HDAC3O15379 RPL23AP35-201ENST00000451906 501 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.79□□□□□ -1.96
HDAC3O15379 TAF9P2-201ENST00000454958 515 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 MTCO3P11-201ENST00000455103 774 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.79□□□□□ -1.96
HDAC3O15379 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.79□□□□□ -1.96
HDAC3O15379 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.79□□□□□ -1.96
HDAC3O15379 BTF3P5-201ENST00000457252 467 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 RNU7-136P-201ENST00000458819 69 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC097493.1-201ENST00000463958 372 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 RPL30P6-201ENST00000475925 342 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 RNF138P1-201ENST00000502765 546 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 MTCO3P44-201ENST00000510977 541 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC074250.1-201ENST00000511117 192 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.79□□□□□ -1.96
HDAC3O15379 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 IGKV2D-36-201ENST00000518643 226 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC025881.1-201ENST00000518851 512 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 225.8 ms