Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC006028.1-201ENST00000438379 402 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.82□□□□□ -1.96
HDAC3O15379 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.82□□□□□ -1.96
HDAC3O15379 RPL30P14-201ENST00000482744 348 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 RPL9P33-201ENST00000484311 566 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 RPL32P34-201ENST00000486380 400 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AC104685.1-201ENST00000502445 371 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 KLRA1P-201ENST00000503499 986 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 XKRY-201ENST00000510392 1100 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 OR5BM1P-201ENST00000512021 366 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 MTCYBP43-201ENST00000513621 740 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC104057.1-201ENST00000515547 497 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 RN7SKP272-201ENST00000516988 232 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 ZNF705CP-201ENST00000530515 889 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.82□□□□□ -1.96
HDAC3O15379 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HDAC3O15379 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.82□□□□□ -1.96
HDAC3O15379 OR4G1P-201ENST00000588632 938 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 RPL12P50-201ENST00000603116 116 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AC243773.3-201ENST00000613270 256 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AC122133.1-201ENST00000613964 233 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 MIR7975-201ENST00000619350 68 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC091931.1-201ENST00000623488 728 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 AF246928.1-201ENST00000623768 87 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.82□□□□□ -1.96
HDAC3O15379 AC092192.1-201ENST00000633154 1018 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 U6.101-201ENST00000637707 76 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HDAC3O15379 ELL2P3-201ENST00000457883 1602 ntBASIC2.82□□□□□ -1.96
HDAC3O15379 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HDAC3O15379 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HDAC3O15379 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HDAC3O15379 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HDAC3O15379 RNU6-374P-201ENST00000364146 108 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 RNU6-660P-201ENST00000364566 109 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SNORA9.2-201ENST00000365361 133 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SNORD116-9-201ENST00000384000 95 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SNORA54-201ENST00000384281 123 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SNORD116-3-201ENST00000384287 95 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SNORD116-7-201ENST00000384404 95 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SNORD116-5-201ENST00000384462 95 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SNORA1.3-201ENST00000384676 136 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SSXP10-201ENST00000402595 565 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.81□□□□□ -1.96
HDAC3O15379 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 AL589823.1-201ENST00000429577 183 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.81□□□□□ -1.96
HDAC3O15379 AC092473.1-201ENST00000441098 221 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 KATNBL1P3-201ENST00000443475 909 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.81□□□□□ -1.96
HDAC3O15379 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.81□□□□□ -1.96
HDAC3O15379 TRBV26-201ENST00000456572 344 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 TPTE2P5-203ENST00000458118 728 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AC091153.1-201ENST00000466297 402 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 PABPC1P3-201ENST00000469174 459 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 SETP11-201ENST00000473027 690 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HDAC3O15379 AC103975.1-201ENST00000482506 483 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 RN7SL297P-201ENST00000483161 293 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 DSTNP2-201ENST00000504533 515 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 MTND1P22-201ENST00000510572 951 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HDAC3O15379 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.81□□□□□ -1.96
HDAC3O15379 RPPH1-2P-201ENST00000516688 293 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HDAC3O15379 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.81□□□□□ -1.96
HDAC3O15379 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.81□□□□□ -1.96
HDAC3O15379 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.81□□□□□ -1.96
HDAC3O15379 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 AL606834.2-201ENST00000602954 668 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AP001981.2-201ENST00000603241 418 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AC015871.2-201ENST00000603605 948 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AC025588.3-201ENST00000604182 274 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AP000787.2-201ENST00000604432 568 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AC009570.1-201ENST00000609599 745 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AL031667.3-201ENST00000620124 655 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 AC139792.2-201ENST00000624218 587 ntBASIC2.81□□□□□ -1.96
HDAC3O15379 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HDAC3O15379 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
HDAC3O15379 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
HDAC3O15379 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms