Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43aQ3TL54 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Trim43aQ3TL54 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Actl10-202ENSMUST00000226583 1501 ntBASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.28■□□□□ 0.36
Trim43aQ3TL54 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trim43aQ3TL54 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43aQ3TL54 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43aQ3TL54 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43aQ3TL54 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43aQ3TL54 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43aQ3TL54 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim43aQ3TL54 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms