Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
H2afb3S4R1G7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb3S4R1G7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.76■□□□□ 0.91
H2afb3S4R1G7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afb3S4R1G7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.75■□□□□ 0.91
H2afb3S4R1G7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.75■□□□□ 0.91
H2afb3S4R1G7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb3S4R1G7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb3S4R1G7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb3S4R1G7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afb3S4R1G7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afb3S4R1G7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
H2afb3S4R1G7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
H2afb3S4R1G7 Particl-201ENSMUST00000205370 1560 ntBASIC20.73■□□□□ 0.91
H2afb3S4R1G7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb3S4R1G7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb3S4R1G7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb3S4R1G7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H2afb3S4R1G7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.71■□□□□ 0.91
H2afb3S4R1G7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb3S4R1G7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
H2afb3S4R1G7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb3S4R1G7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
H2afb3S4R1G7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
H2afb3S4R1G7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb3S4R1G7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
H2afb3S4R1G7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
H2afb3S4R1G7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H2afb3S4R1G7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
H2afb3S4R1G7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
H2afb3S4R1G7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb3S4R1G7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb3S4R1G7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
H2afb3S4R1G7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
H2afb3S4R1G7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
H2afb3S4R1G7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb3S4R1G7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb3S4R1G7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb3S4R1G7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
H2afb3S4R1G7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb3S4R1G7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb3S4R1G7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
H2afb3S4R1G7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
H2afb3S4R1G7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
H2afb3S4R1G7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb3S4R1G7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
H2afb3S4R1G7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb3S4R1G7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.64■□□□□ 0.89
H2afb3S4R1G7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb3S4R1G7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H2afb3S4R1G7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb3S4R1G7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.63■□□□□ 0.89
H2afb3S4R1G7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb3S4R1G7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
H2afb3S4R1G7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
H2afb3S4R1G7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb3S4R1G7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
H2afb3S4R1G7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
H2afb3S4R1G7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
H2afb3S4R1G7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
H2afb3S4R1G7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb3S4R1G7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb3S4R1G7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb3S4R1G7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2afb3S4R1G7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb3S4R1G7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb3S4R1G7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2afb3S4R1G7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
H2afb3S4R1G7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb3S4R1G7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2afb3S4R1G7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
H2afb3S4R1G7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb3S4R1G7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb3S4R1G7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
H2afb3S4R1G7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2afb3S4R1G7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb3S4R1G7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
H2afb3S4R1G7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2afb3S4R1G7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
H2afb3S4R1G7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Nkain2-201ENSMUST00000092602 558 ntBASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2afb3S4R1G7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
H2afb3S4R1G7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb3S4R1G7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb3S4R1G7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
H2afb3S4R1G7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
H2afb3S4R1G7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms