Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Cldn13Q9Z0S4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cldn13Q9Z0S4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn13Q9Z0S4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.68■□□□□ 0.9
Cldn13Q9Z0S4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn13Q9Z0S4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn13Q9Z0S4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn13Q9Z0S4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cldn13Q9Z0S4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn13Q9Z0S4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cldn13Q9Z0S4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cldn13Q9Z0S4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cldn13Q9Z0S4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.66■□□□□ 0.9
Cldn13Q9Z0S4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn13Q9Z0S4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn13Q9Z0S4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn13Q9Z0S4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cldn13Q9Z0S4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn13Q9Z0S4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn13Q9Z0S4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cldn13Q9Z0S4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn13Q9Z0S4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cldn13Q9Z0S4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn13Q9Z0S4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cldn13Q9Z0S4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn13Q9Z0S4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn13Q9Z0S4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cldn13Q9Z0S4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cldn13Q9Z0S4 Gm7432-201ENSMUST00000210343 879 ntBASIC20.63■□□□□ 0.89
Cldn13Q9Z0S4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cldn13Q9Z0S4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cldn13Q9Z0S4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.62■□□□□ 0.89
Cldn13Q9Z0S4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn13Q9Z0S4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn13Q9Z0S4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn13Q9Z0S4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cldn13Q9Z0S4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cldn13Q9Z0S4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn13Q9Z0S4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.59■□□□□ 0.89
Cldn13Q9Z0S4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn13Q9Z0S4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cldn13Q9Z0S4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cldn13Q9Z0S4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn13Q9Z0S4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.58■□□□□ 0.89
Cldn13Q9Z0S4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn13Q9Z0S4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn13Q9Z0S4 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.58■□□□□ 0.89
Cldn13Q9Z0S4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cldn13Q9Z0S4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn13Q9Z0S4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
Cldn13Q9Z0S4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cldn13Q9Z0S4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cldn13Q9Z0S4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn13Q9Z0S4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cldn13Q9Z0S4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cldn13Q9Z0S4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn13Q9Z0S4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn13Q9Z0S4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cldn13Q9Z0S4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn13Q9Z0S4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn13Q9Z0S4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.54■□□□□ 0.88
Cldn13Q9Z0S4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cldn13Q9Z0S4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn13Q9Z0S4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Cldn13Q9Z0S4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.53■□□□□ 0.88
Cldn13Q9Z0S4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn13Q9Z0S4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cldn13Q9Z0S4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn13Q9Z0S4 Gm11599-201ENSMUST00000118720 878 ntBASIC20.52■□□□□ 0.88
Cldn13Q9Z0S4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cldn13Q9Z0S4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
Cldn13Q9Z0S4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn13Q9Z0S4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn13Q9Z0S4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cldn13Q9Z0S4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cldn13Q9Z0S4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn13Q9Z0S4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cldn13Q9Z0S4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cldn13Q9Z0S4 Particl-201ENSMUST00000205370 1560 ntBASIC20.5■□□□□ 0.87
Cldn13Q9Z0S4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cldn13Q9Z0S4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Cldn13Q9Z0S4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn13Q9Z0S4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cldn13Q9Z0S4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Cldn13Q9Z0S4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cldn13Q9Z0S4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cldn13Q9Z0S4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.47■□□□□ 0.87
Cldn13Q9Z0S4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn13Q9Z0S4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn13Q9Z0S4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn13Q9Z0S4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cldn13Q9Z0S4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cldn13Q9Z0S4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms