Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RpgrQ9R0X5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RpgrQ9R0X5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RpgrQ9R0X5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RpgrQ9R0X5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RpgrQ9R0X5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RpgrQ9R0X5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
RpgrQ9R0X5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RpgrQ9R0X5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RpgrQ9R0X5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
RpgrQ9R0X5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RpgrQ9R0X5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RpgrQ9R0X5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RpgrQ9R0X5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RpgrQ9R0X5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RpgrQ9R0X5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RpgrQ9R0X5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.24■■□□□ 1.31
RpgrQ9R0X5 Gm30023-201ENSMUST00000197970 889 ntBASIC23.24■■□□□ 1.31
RpgrQ9R0X5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RpgrQ9R0X5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RpgrQ9R0X5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
RpgrQ9R0X5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RpgrQ9R0X5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RpgrQ9R0X5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
RpgrQ9R0X5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RpgrQ9R0X5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RpgrQ9R0X5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
RpgrQ9R0X5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RpgrQ9R0X5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RpgrQ9R0X5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RpgrQ9R0X5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.2■■□□□ 1.3
RpgrQ9R0X5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RpgrQ9R0X5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
RpgrQ9R0X5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RpgrQ9R0X5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
RpgrQ9R0X5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.19■■□□□ 1.3
RpgrQ9R0X5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
RpgrQ9R0X5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RpgrQ9R0X5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
RpgrQ9R0X5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
RpgrQ9R0X5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RpgrQ9R0X5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.17■■□□□ 1.3
RpgrQ9R0X5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RpgrQ9R0X5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RpgrQ9R0X5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RpgrQ9R0X5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RpgrQ9R0X5 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RpgrQ9R0X5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RpgrQ9R0X5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RpgrQ9R0X5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RpgrQ9R0X5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RpgrQ9R0X5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RpgrQ9R0X5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RpgrQ9R0X5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RpgrQ9R0X5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RpgrQ9R0X5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RpgrQ9R0X5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.14■■□□□ 1.29
RpgrQ9R0X5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.14■■□□□ 1.29
RpgrQ9R0X5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RpgrQ9R0X5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RpgrQ9R0X5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RpgrQ9R0X5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RpgrQ9R0X5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RpgrQ9R0X5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RpgrQ9R0X5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RpgrQ9R0X5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RpgrQ9R0X5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RpgrQ9R0X5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.11■■□□□ 1.29
RpgrQ9R0X5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RpgrQ9R0X5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RpgrQ9R0X5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.1■■□□□ 1.29
RpgrQ9R0X5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RpgrQ9R0X5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.1■■□□□ 1.29
RpgrQ9R0X5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RpgrQ9R0X5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RpgrQ9R0X5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.09■■□□□ 1.29
RpgrQ9R0X5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RpgrQ9R0X5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RpgrQ9R0X5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.08■■□□□ 1.28
RpgrQ9R0X5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RpgrQ9R0X5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RpgrQ9R0X5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RpgrQ9R0X5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RpgrQ9R0X5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
RpgrQ9R0X5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RpgrQ9R0X5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RpgrQ9R0X5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
RpgrQ9R0X5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.06■■□□□ 1.28
RpgrQ9R0X5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
RpgrQ9R0X5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RpgrQ9R0X5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RpgrQ9R0X5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RpgrQ9R0X5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms