Protein–RNA interactions for Protein: Q9DCK3

Tspan4, Tetraspanin-4, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan4Q9DCK3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tspan4Q9DCK3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tspan4Q9DCK3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tspan4Q9DCK3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan4Q9DCK3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan4Q9DCK3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.31■□□□□ 0.68
Tspan4Q9DCK3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan4Q9DCK3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan4Q9DCK3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.31■□□□□ 0.68
Tspan4Q9DCK3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tspan4Q9DCK3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan4Q9DCK3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan4Q9DCK3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tspan4Q9DCK3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Tspan4Q9DCK3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan4Q9DCK3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan4Q9DCK3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Tspan4Q9DCK3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tspan4Q9DCK3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tspan4Q9DCK3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan4Q9DCK3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tspan4Q9DCK3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tspan4Q9DCK3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tspan4Q9DCK3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Tspan4Q9DCK3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tspan4Q9DCK3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.26■□□□□ 0.67
Tspan4Q9DCK3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tspan4Q9DCK3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tspan4Q9DCK3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tspan4Q9DCK3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan4Q9DCK3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan4Q9DCK3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tspan4Q9DCK3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan4Q9DCK3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan4Q9DCK3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tspan4Q9DCK3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tspan4Q9DCK3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tspan4Q9DCK3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan4Q9DCK3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Tspan4Q9DCK3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan4Q9DCK3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan4Q9DCK3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tspan4Q9DCK3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tspan4Q9DCK3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tspan4Q9DCK3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Tspan4Q9DCK3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tspan4Q9DCK3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tspan4Q9DCK3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tspan4Q9DCK3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan4Q9DCK3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Tspan4Q9DCK3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tspan4Q9DCK3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan4Q9DCK3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan4Q9DCK3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.18■□□□□ 0.66
Tspan4Q9DCK3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tspan4Q9DCK3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.18■□□□□ 0.66
Tspan4Q9DCK3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tspan4Q9DCK3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tspan4Q9DCK3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tspan4Q9DCK3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tspan4Q9DCK3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan4Q9DCK3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tspan4Q9DCK3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan4Q9DCK3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Tspan4Q9DCK3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tspan4Q9DCK3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Tspan4Q9DCK3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.14■□□□□ 0.65
Tspan4Q9DCK3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tspan4Q9DCK3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan4Q9DCK3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan4Q9DCK3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.12■□□□□ 0.65
Tspan4Q9DCK3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan4Q9DCK3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tspan4Q9DCK3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan4Q9DCK3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan4Q9DCK3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tspan4Q9DCK3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tspan4Q9DCK3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms