Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.08■■□□□ 1.29
Rrp8Q9DB85 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.08■■□□□ 1.29
Rrp8Q9DB85 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.08■■□□□ 1.29
Rrp8Q9DB85 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rrp8Q9DB85 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.06■■□□□ 1.28
Rrp8Q9DB85 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rrp8Q9DB85 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rrp8Q9DB85 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rrp8Q9DB85 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Rrp8Q9DB85 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rrp8Q9DB85 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rrp8Q9DB85 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rrp8Q9DB85 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rrp8Q9DB85 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rrp8Q9DB85 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rrp8Q9DB85 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rrp8Q9DB85 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Rrp8Q9DB85 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rrp8Q9DB85 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rrp8Q9DB85 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Rrp8Q9DB85 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rrp8Q9DB85 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rrp8Q9DB85 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Rrp8Q9DB85 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rrp8Q9DB85 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rrp8Q9DB85 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.99■■□□□ 1.27
Rrp8Q9DB85 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rrp8Q9DB85 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rrp8Q9DB85 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.99■■□□□ 1.27
Rrp8Q9DB85 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
Rrp8Q9DB85 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rrp8Q9DB85 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.97■■□□□ 1.27
Rrp8Q9DB85 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Rrp8Q9DB85 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Rrp8Q9DB85 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rrp8Q9DB85 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rrp8Q9DB85 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rrp8Q9DB85 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Rrp8Q9DB85 Gm14523-201ENSMUST00000117260 558 ntBASIC22.96■■□□□ 1.27
Rrp8Q9DB85 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rrp8Q9DB85 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rrp8Q9DB85 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rrp8Q9DB85 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rrp8Q9DB85 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rrp8Q9DB85 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rrp8Q9DB85 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rrp8Q9DB85 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rrp8Q9DB85 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rrp8Q9DB85 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rrp8Q9DB85 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rrp8Q9DB85 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.95■■□□□ 1.26
Rrp8Q9DB85 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rrp8Q9DB85 Zxda-201ENSMUST00000117281 2621 ntBASIC22.94■■□□□ 1.26
Rrp8Q9DB85 Gm9812-201ENSMUST00000061934 968 ntBASIC22.94■■□□□ 1.26
Rrp8Q9DB85 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rrp8Q9DB85 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rrp8Q9DB85 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Rrp8Q9DB85 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Rrp8Q9DB85 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
Rrp8Q9DB85 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rrp8Q9DB85 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rrp8Q9DB85 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.92■■□□□ 1.26
Rrp8Q9DB85 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rrp8Q9DB85 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Rrp8Q9DB85 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.91■■□□□ 1.26
Rrp8Q9DB85 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.91■■□□□ 1.26
Rrp8Q9DB85 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.91■■□□□ 1.26
Rrp8Q9DB85 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rrp8Q9DB85 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Rrp8Q9DB85 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.91■■□□□ 1.26
Rrp8Q9DB85 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rrp8Q9DB85 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rrp8Q9DB85 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.88■■□□□ 1.25
Rrp8Q9DB85 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rrp8Q9DB85 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Rrp8Q9DB85 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rrp8Q9DB85 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.87■■□□□ 1.25
Rrp8Q9DB85 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.87■■□□□ 1.25
Rrp8Q9DB85 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rrp8Q9DB85 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rrp8Q9DB85 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.86■■□□□ 1.25
Rrp8Q9DB85 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Rrp8Q9DB85 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.86■■□□□ 1.25
Rrp8Q9DB85 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rrp8Q9DB85 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rrp8Q9DB85 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rrp8Q9DB85 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.82■■□□□ 1.24
Rrp8Q9DB85 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rrp8Q9DB85 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rrp8Q9DB85 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rrp8Q9DB85 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rrp8Q9DB85 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rrp8Q9DB85 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.8■■□□□ 1.24
Rrp8Q9DB85 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Rrp8Q9DB85 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.79■■□□□ 1.24
Rrp8Q9DB85 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Rrp8Q9DB85 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rrp8Q9DB85 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.77■■□□□ 1.24
Rrp8Q9DB85 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rrp8Q9DB85 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms