Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.59■■□□□ 1.37
Lsm7Q9CQQ8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm7Q9CQQ8 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.58■■□□□ 1.37
Lsm7Q9CQQ8 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.58■■□□□ 1.37
Lsm7Q9CQQ8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm7Q9CQQ8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lsm7Q9CQQ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Lsm7Q9CQQ8 Gm11175-201ENSMUST00000116172 543 ntBASIC23.57■■□□□ 1.36
Lsm7Q9CQQ8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Lsm7Q9CQQ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.57■■□□□ 1.36
Lsm7Q9CQQ8 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.57■■□□□ 1.36
Lsm7Q9CQQ8 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.56■■□□□ 1.36
Lsm7Q9CQQ8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Lsm7Q9CQQ8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lsm7Q9CQQ8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lsm7Q9CQQ8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lsm7Q9CQQ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.54■■□□□ 1.36
Lsm7Q9CQQ8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Lsm7Q9CQQ8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lsm7Q9CQQ8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lsm7Q9CQQ8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.53■■□□□ 1.36
Lsm7Q9CQQ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lsm7Q9CQQ8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Lsm7Q9CQQ8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Lsm7Q9CQQ8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.52■■□□□ 1.36
Lsm7Q9CQQ8 Gm45364-201ENSMUST00000210883 159 ntBASIC23.5■■□□□ 1.35
Lsm7Q9CQQ8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Lsm7Q9CQQ8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.5■■□□□ 1.35
Lsm7Q9CQQ8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lsm7Q9CQQ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lsm7Q9CQQ8 Scarna2-201ENSMUST00000157560 414 ntBASIC23.48■■□□□ 1.35
Lsm7Q9CQQ8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.48■■□□□ 1.35
Lsm7Q9CQQ8 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.48■■□□□ 1.35
Lsm7Q9CQQ8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsm7Q9CQQ8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lsm7Q9CQQ8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsm7Q9CQQ8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lsm7Q9CQQ8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsm7Q9CQQ8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsm7Q9CQQ8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lsm7Q9CQQ8 Gm11687-201ENSMUST00000118911 886 ntBASIC23.46■■□□□ 1.35
Lsm7Q9CQQ8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lsm7Q9CQQ8 Gm9806-201ENSMUST00000051080 552 ntBASIC23.46■■□□□ 1.35
Lsm7Q9CQQ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Lsm7Q9CQQ8 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.45■■□□□ 1.34
Lsm7Q9CQQ8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Lsm7Q9CQQ8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lsm7Q9CQQ8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.44■■□□□ 1.34
Lsm7Q9CQQ8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsm7Q9CQQ8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsm7Q9CQQ8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsm7Q9CQQ8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsm7Q9CQQ8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lsm7Q9CQQ8 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.41■■□□□ 1.34
Lsm7Q9CQQ8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lsm7Q9CQQ8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lsm7Q9CQQ8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.41■■□□□ 1.34
Lsm7Q9CQQ8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lsm7Q9CQQ8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lsm7Q9CQQ8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Lsm7Q9CQQ8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lsm7Q9CQQ8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Lsm7Q9CQQ8 Gm16437-201ENSMUST00000025669 507 ntBASIC23.39■■□□□ 1.33
Lsm7Q9CQQ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lsm7Q9CQQ8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Lsm7Q9CQQ8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Lsm7Q9CQQ8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lsm7Q9CQQ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.37■■□□□ 1.33
Lsm7Q9CQQ8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lsm7Q9CQQ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lsm7Q9CQQ8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.37■■□□□ 1.33
Lsm7Q9CQQ8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lsm7Q9CQQ8 Gm9812-201ENSMUST00000061934 968 ntBASIC23.36■■□□□ 1.33
Lsm7Q9CQQ8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lsm7Q9CQQ8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lsm7Q9CQQ8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lsm7Q9CQQ8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.35■■□□□ 1.33
Lsm7Q9CQQ8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.35■■□□□ 1.33
Lsm7Q9CQQ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Lsm7Q9CQQ8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Lsm7Q9CQQ8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Lsm7Q9CQQ8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Lsm7Q9CQQ8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.34■■□□□ 1.33
Lsm7Q9CQQ8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Lsm7Q9CQQ8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lsm7Q9CQQ8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Lsm7Q9CQQ8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Lsm7Q9CQQ8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lsm7Q9CQQ8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lsm7Q9CQQ8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lsm7Q9CQQ8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
Lsm7Q9CQQ8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.29■■□□□ 1.32
Lsm7Q9CQQ8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms