Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim16Q99PP9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Trim16Q99PP9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim16Q99PP9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim16Q99PP9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim16Q99PP9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim16Q99PP9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim16Q99PP9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Trim16Q99PP9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim16Q99PP9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Trim16Q99PP9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim16Q99PP9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim16Q99PP9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim16Q99PP9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim16Q99PP9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.44■■□□□ 1.18
Trim16Q99PP9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim16Q99PP9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim16Q99PP9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim16Q99PP9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
Trim16Q99PP9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim16Q99PP9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim16Q99PP9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.43■■□□□ 1.18
Trim16Q99PP9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim16Q99PP9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim16Q99PP9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim16Q99PP9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim16Q99PP9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim16Q99PP9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim16Q99PP9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.42■■□□□ 1.18
Trim16Q99PP9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.42■■□□□ 1.18
Trim16Q99PP9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim16Q99PP9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim16Q99PP9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim16Q99PP9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.41■■□□□ 1.18
Trim16Q99PP9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim16Q99PP9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim16Q99PP9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim16Q99PP9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Trim16Q99PP9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Trim16Q99PP9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim16Q99PP9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim16Q99PP9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim16Q99PP9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim16Q99PP9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.38■■□□□ 1.17
Trim16Q99PP9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim16Q99PP9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim16Q99PP9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim16Q99PP9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim16Q99PP9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.36■■□□□ 1.17
Trim16Q99PP9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim16Q99PP9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.36■■□□□ 1.17
Trim16Q99PP9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim16Q99PP9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim16Q99PP9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim16Q99PP9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim16Q99PP9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Trim16Q99PP9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim16Q99PP9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim16Q99PP9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Trim16Q99PP9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim16Q99PP9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim16Q99PP9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.31■■□□□ 1.16
Trim16Q99PP9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.31■■□□□ 1.16
Trim16Q99PP9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Trim16Q99PP9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim16Q99PP9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim16Q99PP9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim16Q99PP9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim16Q99PP9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim16Q99PP9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Trim16Q99PP9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim16Q99PP9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim16Q99PP9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim16Q99PP9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim16Q99PP9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim16Q99PP9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim16Q99PP9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim16Q99PP9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim16Q99PP9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim16Q99PP9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Trim16Q99PP9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim16Q99PP9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim16Q99PP9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Trim16Q99PP9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim16Q99PP9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
Trim16Q99PP9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Trim16Q99PP9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim16Q99PP9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Trim16Q99PP9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim16Q99PP9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trim16Q99PP9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim16Q99PP9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Trim16Q99PP9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Trim16Q99PP9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim16Q99PP9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim16Q99PP9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trim16Q99PP9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.21■■□□□ 1.15
Trim16Q99PP9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trim16Q99PP9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim16Q99PP9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms