Protein–RNA interactions for Protein: Q99KN9

Clint1, Clathrin interactor 1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clint1Q99KN9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clint1Q99KN9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.89■□□□□ 0.93
Clint1Q99KN9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clint1Q99KN9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clint1Q99KN9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Clint1Q99KN9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clint1Q99KN9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Clint1Q99KN9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clint1Q99KN9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clint1Q99KN9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.85■□□□□ 0.93
Clint1Q99KN9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clint1Q99KN9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.85■□□□□ 0.93
Clint1Q99KN9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clint1Q99KN9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clint1Q99KN9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clint1Q99KN9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.84■□□□□ 0.93
Clint1Q99KN9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.84■□□□□ 0.93
Clint1Q99KN9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clint1Q99KN9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Clint1Q99KN9 Particl-201ENSMUST00000205370 1560 ntBASIC20.83■□□□□ 0.92
Clint1Q99KN9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clint1Q99KN9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clint1Q99KN9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clint1Q99KN9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clint1Q99KN9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Clint1Q99KN9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clint1Q99KN9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clint1Q99KN9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Clint1Q99KN9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clint1Q99KN9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clint1Q99KN9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clint1Q99KN9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clint1Q99KN9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clint1Q99KN9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clint1Q99KN9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Clint1Q99KN9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clint1Q99KN9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clint1Q99KN9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.78■□□□□ 0.92
Clint1Q99KN9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clint1Q99KN9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.77■□□□□ 0.92
Clint1Q99KN9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clint1Q99KN9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.76■□□□□ 0.91
Clint1Q99KN9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.76■□□□□ 0.91
Clint1Q99KN9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clint1Q99KN9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clint1Q99KN9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clint1Q99KN9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Clint1Q99KN9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clint1Q99KN9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.75■□□□□ 0.91
Clint1Q99KN9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clint1Q99KN9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clint1Q99KN9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clint1Q99KN9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clint1Q99KN9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clint1Q99KN9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Clint1Q99KN9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clint1Q99KN9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.71■□□□□ 0.91
Clint1Q99KN9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clint1Q99KN9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clint1Q99KN9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clint1Q99KN9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clint1Q99KN9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clint1Q99KN9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clint1Q99KN9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clint1Q99KN9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clint1Q99KN9 Gm6311-201ENSMUST00000073790 878 ntBASIC20.7■□□□□ 0.9
Clint1Q99KN9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clint1Q99KN9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Clint1Q99KN9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clint1Q99KN9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clint1Q99KN9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clint1Q99KN9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clint1Q99KN9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clint1Q99KN9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clint1Q99KN9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clint1Q99KN9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clint1Q99KN9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.67■□□□□ 0.9
Clint1Q99KN9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clint1Q99KN9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clint1Q99KN9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Clint1Q99KN9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clint1Q99KN9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Clint1Q99KN9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clint1Q99KN9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.64■□□□□ 0.9
Clint1Q99KN9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clint1Q99KN9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Clint1Q99KN9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clint1Q99KN9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Clint1Q99KN9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clint1Q99KN9 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Clint1Q99KN9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clint1Q99KN9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clint1Q99KN9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clint1Q99KN9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clint1Q99KN9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clint1Q99KN9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clint1Q99KN9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Clint1Q99KN9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clint1Q99KN9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clint1Q99KN9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms