Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhga3Q91XY5 Gm6821-201ENSMUST00000107540 542 ntBASIC20.51■□□□□ 0.87
Pcdhga3Q91XY5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pcdhga3Q91XY5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga3Q91XY5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhga3Q91XY5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga3Q91XY5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga3Q91XY5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhga3Q91XY5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhga3Q91XY5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhga3Q91XY5 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.46■□□□□ 0.87
Pcdhga3Q91XY5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pcdhga3Q91XY5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga3Q91XY5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga3Q91XY5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga3Q91XY5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga3Q91XY5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhga3Q91XY5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Gm8503-201ENSMUST00000118131 455 ntBASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga3Q91XY5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga3Q91XY5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhga3Q91XY5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga3Q91XY5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga3Q91XY5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga3Q91XY5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.37■□□□□ 0.85
Pcdhga3Q91XY5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.36■□□□□ 0.85
Pcdhga3Q91XY5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga3Q91XY5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga3Q91XY5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhga3Q91XY5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Particl-201ENSMUST00000205370 1560 ntBASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga3Q91XY5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga3Q91XY5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga3Q91XY5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga3Q91XY5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhga3Q91XY5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga3Q91XY5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhga3Q91XY5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga3Q91XY5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga3Q91XY5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga3Q91XY5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga3Q91XY5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga3Q91XY5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms