Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Rab40bQ8VHP8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rab40bQ8VHP8 Particl-201ENSMUST00000205370 1560 ntBASIC20.89■□□□□ 0.93
Rab40bQ8VHP8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab40bQ8VHP8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab40bQ8VHP8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rab40bQ8VHP8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rab40bQ8VHP8 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.88■□□□□ 0.93
Rab40bQ8VHP8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
Rab40bQ8VHP8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rab40bQ8VHP8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab40bQ8VHP8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.87■□□□□ 0.93
Rab40bQ8VHP8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Rab40bQ8VHP8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab40bQ8VHP8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab40bQ8VHP8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab40bQ8VHP8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rab40bQ8VHP8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab40bQ8VHP8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab40bQ8VHP8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rab40bQ8VHP8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.83■□□□□ 0.92
Rab40bQ8VHP8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab40bQ8VHP8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab40bQ8VHP8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Rab40bQ8VHP8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab40bQ8VHP8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rab40bQ8VHP8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab40bQ8VHP8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.8■□□□□ 0.92
Rab40bQ8VHP8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Rab40bQ8VHP8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab40bQ8VHP8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.79■□□□□ 0.92
Rab40bQ8VHP8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rab40bQ8VHP8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab40bQ8VHP8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab40bQ8VHP8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.78■□□□□ 0.92
Rab40bQ8VHP8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40bQ8VHP8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40bQ8VHP8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40bQ8VHP8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40bQ8VHP8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40bQ8VHP8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rab40bQ8VHP8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab40bQ8VHP8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab40bQ8VHP8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rab40bQ8VHP8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rab40bQ8VHP8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Rab40bQ8VHP8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab40bQ8VHP8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab40bQ8VHP8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab40bQ8VHP8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.74■□□□□ 0.91
Rab40bQ8VHP8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rab40bQ8VHP8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rab40bQ8VHP8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab40bQ8VHP8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab40bQ8VHP8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab40bQ8VHP8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab40bQ8VHP8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab40bQ8VHP8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab40bQ8VHP8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rab40bQ8VHP8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rab40bQ8VHP8 Gm30023-201ENSMUST00000197970 889 ntBASIC20.72■□□□□ 0.91
Rab40bQ8VHP8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab40bQ8VHP8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rab40bQ8VHP8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rab40bQ8VHP8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rab40bQ8VHP8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rab40bQ8VHP8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.7■□□□□ 0.9
Rab40bQ8VHP8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rab40bQ8VHP8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab40bQ8VHP8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab40bQ8VHP8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rab40bQ8VHP8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.69■□□□□ 0.9
Rab40bQ8VHP8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rab40bQ8VHP8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rab40bQ8VHP8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab40bQ8VHP8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms