Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Sgms1Q8VCQ6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sgms1Q8VCQ6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Sgms1Q8VCQ6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Sgms1Q8VCQ6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sgms1Q8VCQ6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sgms1Q8VCQ6 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.31■■□□□ 1.64
Sgms1Q8VCQ6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sgms1Q8VCQ6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sgms1Q8VCQ6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sgms1Q8VCQ6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sgms1Q8VCQ6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.28■■□□□ 1.64
Sgms1Q8VCQ6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sgms1Q8VCQ6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Sgms1Q8VCQ6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Sgms1Q8VCQ6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sgms1Q8VCQ6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sgms1Q8VCQ6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sgms1Q8VCQ6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sgms1Q8VCQ6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sgms1Q8VCQ6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sgms1Q8VCQ6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Sgms1Q8VCQ6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sgms1Q8VCQ6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sgms1Q8VCQ6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sgms1Q8VCQ6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sgms1Q8VCQ6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sgms1Q8VCQ6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Sgms1Q8VCQ6 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.15■■□□□ 1.62
Sgms1Q8VCQ6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sgms1Q8VCQ6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sgms1Q8VCQ6 Gm37136-201ENSMUST00000194368 194 ntBASIC25.13■■□□□ 1.61
Sgms1Q8VCQ6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sgms1Q8VCQ6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sgms1Q8VCQ6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sgms1Q8VCQ6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sgms1Q8VCQ6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sgms1Q8VCQ6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sgms1Q8VCQ6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Sgms1Q8VCQ6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sgms1Q8VCQ6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sgms1Q8VCQ6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sgms1Q8VCQ6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sgms1Q8VCQ6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sgms1Q8VCQ6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Sgms1Q8VCQ6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms