Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.81■■□□□ 1.08
Vmn1r38Q8R2E1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vmn1r38Q8R2E1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vmn1r38Q8R2E1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r38Q8R2E1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Vmn1r38Q8R2E1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r38Q8R2E1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r38Q8R2E1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r38Q8R2E1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r38Q8R2E1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r38Q8R2E1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.78■■□□□ 1.08
Vmn1r38Q8R2E1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r38Q8R2E1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Vmn1r38Q8R2E1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r38Q8R2E1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r38Q8R2E1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r38Q8R2E1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r38Q8R2E1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.75■■□□□ 1.07
Vmn1r38Q8R2E1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r38Q8R2E1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r38Q8R2E1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r38Q8R2E1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r38Q8R2E1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r38Q8R2E1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r38Q8R2E1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r38Q8R2E1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Vmn1r38Q8R2E1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Vmn1r38Q8R2E1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r38Q8R2E1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r38Q8R2E1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.71■■□□□ 1.07
Vmn1r38Q8R2E1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r38Q8R2E1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r38Q8R2E1 Particl-201ENSMUST00000205370 1560 ntBASIC21.7■■□□□ 1.06
Vmn1r38Q8R2E1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r38Q8R2E1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r38Q8R2E1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r38Q8R2E1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r38Q8R2E1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r38Q8R2E1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vmn1r38Q8R2E1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.68■■□□□ 1.06
Vmn1r38Q8R2E1 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.68■■□□□ 1.06
Vmn1r38Q8R2E1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r38Q8R2E1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r38Q8R2E1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r38Q8R2E1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r38Q8R2E1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r38Q8R2E1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r38Q8R2E1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r38Q8R2E1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r38Q8R2E1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r38Q8R2E1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r38Q8R2E1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Vmn1r38Q8R2E1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r38Q8R2E1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r38Q8R2E1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r38Q8R2E1 Gm45855-201ENSMUST00000212546 880 ntBASIC21.63■■□□□ 1.05
Vmn1r38Q8R2E1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r38Q8R2E1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vmn1r38Q8R2E1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Vmn1r38Q8R2E1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vmn1r38Q8R2E1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r38Q8R2E1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.61■■□□□ 1.05
Vmn1r38Q8R2E1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r38Q8R2E1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r38Q8R2E1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.59■■□□□ 1.05
Vmn1r38Q8R2E1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r38Q8R2E1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r38Q8R2E1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r38Q8R2E1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r38Q8R2E1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.59■■□□□ 1.05
Vmn1r38Q8R2E1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r38Q8R2E1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.58■■□□□ 1.05
Vmn1r38Q8R2E1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r38Q8R2E1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.58■■□□□ 1.05
Vmn1r38Q8R2E1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.58■■□□□ 1.04
Vmn1r38Q8R2E1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r38Q8R2E1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r38Q8R2E1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r38Q8R2E1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r38Q8R2E1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r38Q8R2E1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Vmn1r38Q8R2E1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vmn1r38Q8R2E1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r38Q8R2E1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r38Q8R2E1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r38Q8R2E1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Vmn1r38Q8R2E1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r38Q8R2E1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r38Q8R2E1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r38Q8R2E1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r38Q8R2E1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r38Q8R2E1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vmn1r38Q8R2E1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms