Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim31Q8R0K2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Trim31Q8R0K2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim31Q8R0K2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trim31Q8R0K2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim31Q8R0K2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.53■■□□□ 1.2
Trim31Q8R0K2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim31Q8R0K2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.52■■□□□ 1.2
Trim31Q8R0K2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim31Q8R0K2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Trim31Q8R0K2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.51■■□□□ 1.19
Trim31Q8R0K2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim31Q8R0K2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim31Q8R0K2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trim31Q8R0K2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim31Q8R0K2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Trim31Q8R0K2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim31Q8R0K2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim31Q8R0K2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim31Q8R0K2 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.49■■□□□ 1.19
Trim31Q8R0K2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Trim31Q8R0K2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim31Q8R0K2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim31Q8R0K2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim31Q8R0K2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim31Q8R0K2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Trim31Q8R0K2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim31Q8R0K2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Trim31Q8R0K2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim31Q8R0K2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim31Q8R0K2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.46■■□□□ 1.19
Trim31Q8R0K2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
Trim31Q8R0K2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
Trim31Q8R0K2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim31Q8R0K2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trim31Q8R0K2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
Trim31Q8R0K2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Trim31Q8R0K2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim31Q8R0K2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim31Q8R0K2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim31Q8R0K2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim31Q8R0K2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim31Q8R0K2 Gm11599-201ENSMUST00000118720 878 ntBASIC22.43■■□□□ 1.18
Trim31Q8R0K2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.43■■□□□ 1.18
Trim31Q8R0K2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.43■■□□□ 1.18
Trim31Q8R0K2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim31Q8R0K2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim31Q8R0K2 Particl-201ENSMUST00000205370 1560 ntBASIC22.42■■□□□ 1.18
Trim31Q8R0K2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Trim31Q8R0K2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim31Q8R0K2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Trim31Q8R0K2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Trim31Q8R0K2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Trim31Q8R0K2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Trim31Q8R0K2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.4■■□□□ 1.18
Trim31Q8R0K2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim31Q8R0K2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.4■■□□□ 1.18
Trim31Q8R0K2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Trim31Q8R0K2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim31Q8R0K2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.39■■□□□ 1.17
Trim31Q8R0K2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Trim31Q8R0K2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim31Q8R0K2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Trim31Q8R0K2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trim31Q8R0K2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim31Q8R0K2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim31Q8R0K2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Trim31Q8R0K2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim31Q8R0K2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim31Q8R0K2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim31Q8R0K2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim31Q8R0K2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
Trim31Q8R0K2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim31Q8R0K2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim31Q8R0K2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim31Q8R0K2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim31Q8R0K2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim31Q8R0K2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim31Q8R0K2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim31Q8R0K2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim31Q8R0K2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Trim31Q8R0K2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim31Q8R0K2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim31Q8R0K2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim31Q8R0K2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim31Q8R0K2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim31Q8R0K2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim31Q8R0K2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.29■■□□□ 1.16
Trim31Q8R0K2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim31Q8R0K2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim31Q8R0K2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim31Q8R0K2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim31Q8R0K2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim31Q8R0K2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim31Q8R0K2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim31Q8R0K2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Trim31Q8R0K2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Trim31Q8R0K2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim31Q8R0K2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim31Q8R0K2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms