Protein–RNA interactions for Protein: Q8K2Z4

Ncapd2, Condensin complex subunit 1, mousemouse

Predictions only

Length 1,392 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ncapd2Q8K2Z4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ncapd2Q8K2Z4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ncapd2Q8K2Z4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ncapd2Q8K2Z4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Ncapd2Q8K2Z4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Ncapd2Q8K2Z4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ncapd2Q8K2Z4 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.57■■■□□ 2.64
Ncapd2Q8K2Z4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ncapd2Q8K2Z4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ncapd2Q8K2Z4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Ncapd2Q8K2Z4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ncapd2Q8K2Z4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ncapd2Q8K2Z4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Ncapd2Q8K2Z4 Gm14523-201ENSMUST00000117260 558 ntBASIC31.54■■■□□ 2.64
Ncapd2Q8K2Z4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ncapd2Q8K2Z4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ncapd2Q8K2Z4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ncapd2Q8K2Z4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.52■■■□□ 2.64
Ncapd2Q8K2Z4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ncapd2Q8K2Z4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Ncapd2Q8K2Z4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.5■■■□□ 2.63
Ncapd2Q8K2Z4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.49■■■□□ 2.63
Ncapd2Q8K2Z4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ncapd2Q8K2Z4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Ncapd2Q8K2Z4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ncapd2Q8K2Z4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ncapd2Q8K2Z4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC31.47■■■□□ 2.63
Ncapd2Q8K2Z4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.47■■■□□ 2.63
Ncapd2Q8K2Z4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ncapd2Q8K2Z4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ncapd2Q8K2Z4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ncapd2Q8K2Z4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ncapd2Q8K2Z4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ncapd2Q8K2Z4 Zxda-201ENSMUST00000117281 2621 ntBASIC31.44■■■□□ 2.62
Ncapd2Q8K2Z4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC31.43■■■□□ 2.62
Ncapd2Q8K2Z4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ncapd2Q8K2Z4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Ncapd2Q8K2Z4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ncapd2Q8K2Z4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Ncapd2Q8K2Z4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ncapd2Q8K2Z4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ncapd2Q8K2Z4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ncapd2Q8K2Z4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.4■■■□□ 2.62
Ncapd2Q8K2Z4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.4■■■□□ 2.62
Ncapd2Q8K2Z4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Ncapd2Q8K2Z4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.39■■■□□ 2.62
Ncapd2Q8K2Z4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ncapd2Q8K2Z4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.38■■■□□ 2.61
Ncapd2Q8K2Z4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ncapd2Q8K2Z4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Ncapd2Q8K2Z4 Gm5812-201ENSMUST00000061073 957 ntBASIC31.38■■■□□ 2.61
Ncapd2Q8K2Z4 Gm9812-201ENSMUST00000061934 968 ntBASIC31.38■■■□□ 2.61
Ncapd2Q8K2Z4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
Ncapd2Q8K2Z4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Ncapd2Q8K2Z4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.37■■■□□ 2.61
Ncapd2Q8K2Z4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Ncapd2Q8K2Z4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
Ncapd2Q8K2Z4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ncapd2Q8K2Z4 Gm15039-201ENSMUST00000118914 875 ntBASIC31.36■■■□□ 2.61
Ncapd2Q8K2Z4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ncapd2Q8K2Z4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Ncapd2Q8K2Z4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ncapd2Q8K2Z4 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.35■■■□□ 2.61
Ncapd2Q8K2Z4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Ncapd2Q8K2Z4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Ncapd2Q8K2Z4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Ncapd2Q8K2Z4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Ncapd2Q8K2Z4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ncapd2Q8K2Z4 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.33■■■□□ 2.61
Ncapd2Q8K2Z4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ncapd2Q8K2Z4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.32■■■□□ 2.6
Ncapd2Q8K2Z4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ncapd2Q8K2Z4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ncapd2Q8K2Z4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Ncapd2Q8K2Z4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.31■■■□□ 2.6
Ncapd2Q8K2Z4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ncapd2Q8K2Z4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Ncapd2Q8K2Z4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ncapd2Q8K2Z4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.29■■■□□ 2.6
Ncapd2Q8K2Z4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC31.28■■■□□ 2.6
Ncapd2Q8K2Z4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Ncapd2Q8K2Z4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ncapd2Q8K2Z4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ncapd2Q8K2Z4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Ncapd2Q8K2Z4 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.27■■■□□ 2.6
Ncapd2Q8K2Z4 Gm22567-201ENSMUST00000175542 342 ntBASIC31.27■■■□□ 2.6
Ncapd2Q8K2Z4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Ncapd2Q8K2Z4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Ncapd2Q8K2Z4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
Ncapd2Q8K2Z4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC31.25■■■□□ 2.59
Ncapd2Q8K2Z4 Gm5921-201ENSMUST00000075898 882 ntBASIC31.24■■■□□ 2.59
Ncapd2Q8K2Z4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
Ncapd2Q8K2Z4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Ncapd2Q8K2Z4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.22■■■□□ 2.59
Ncapd2Q8K2Z4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Ncapd2Q8K2Z4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ncapd2Q8K2Z4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.21■■■□□ 2.59
Ncapd2Q8K2Z4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ncapd2Q8K2Z4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Ncapd2Q8K2Z4 Gm10420-201ENSMUST00000121713 882 ntBASIC31.19■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms