Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn1Q8K0T0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn1Q8K0T0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn1Q8K0T0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Rtn1Q8K0T0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rtn1Q8K0T0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Rtn1Q8K0T0 Gm7432-201ENSMUST00000210343 879 ntBASIC26.93■■□□□ 1.9
Rtn1Q8K0T0 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.93■■□□□ 1.9
Rtn1Q8K0T0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rtn1Q8K0T0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.92■■□□□ 1.9
Rtn1Q8K0T0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rtn1Q8K0T0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rtn1Q8K0T0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rtn1Q8K0T0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rtn1Q8K0T0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rtn1Q8K0T0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rtn1Q8K0T0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rtn1Q8K0T0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Rtn1Q8K0T0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Rtn1Q8K0T0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Rtn1Q8K0T0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.86■■□□□ 1.89
Rtn1Q8K0T0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Rtn1Q8K0T0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rtn1Q8K0T0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Rtn1Q8K0T0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rtn1Q8K0T0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rtn1Q8K0T0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rtn1Q8K0T0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rtn1Q8K0T0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.84■■□□□ 1.89
Rtn1Q8K0T0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rtn1Q8K0T0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
Rtn1Q8K0T0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Rtn1Q8K0T0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rtn1Q8K0T0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.88
Rtn1Q8K0T0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Rtn1Q8K0T0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rtn1Q8K0T0 Gm11599-201ENSMUST00000118720 878 ntBASIC26.82■■□□□ 1.88
Rtn1Q8K0T0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
Rtn1Q8K0T0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rtn1Q8K0T0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Rtn1Q8K0T0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rtn1Q8K0T0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rtn1Q8K0T0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.8■■□□□ 1.88
Rtn1Q8K0T0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rtn1Q8K0T0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rtn1Q8K0T0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.79■■□□□ 1.88
Rtn1Q8K0T0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Rtn1Q8K0T0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rtn1Q8K0T0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rtn1Q8K0T0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rtn1Q8K0T0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn1Q8K0T0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn1Q8K0T0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.74■■□□□ 1.87
Rtn1Q8K0T0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn1Q8K0T0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rtn1Q8K0T0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Rtn1Q8K0T0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rtn1Q8K0T0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rtn1Q8K0T0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rtn1Q8K0T0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.72■■□□□ 1.87
Rtn1Q8K0T0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rtn1Q8K0T0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rtn1Q8K0T0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rtn1Q8K0T0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rtn1Q8K0T0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rtn1Q8K0T0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rtn1Q8K0T0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rtn1Q8K0T0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rtn1Q8K0T0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Rtn1Q8K0T0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.69■■□□□ 1.86
Rtn1Q8K0T0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Rtn1Q8K0T0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rtn1Q8K0T0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn1Q8K0T0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn1Q8K0T0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn1Q8K0T0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rtn1Q8K0T0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rtn1Q8K0T0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rtn1Q8K0T0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rtn1Q8K0T0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rtn1Q8K0T0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rtn1Q8K0T0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rtn1Q8K0T0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rtn1Q8K0T0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rtn1Q8K0T0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
Rtn1Q8K0T0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rtn1Q8K0T0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Rtn1Q8K0T0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Rtn1Q8K0T0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rtn1Q8K0T0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn1Q8K0T0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn1Q8K0T0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn1Q8K0T0 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.61■■□□□ 1.85
Rtn1Q8K0T0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn1Q8K0T0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rtn1Q8K0T0 Gm4799-201ENSMUST00000095396 657 ntBASIC26.6■■□□□ 1.85
Rtn1Q8K0T0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Rtn1Q8K0T0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Rtn1Q8K0T0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rtn1Q8K0T0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.59■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 116.2 ms