Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Csnka2ipQ8CH19 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Csnka2ipQ8CH19 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Csnka2ipQ8CH19 Gm37136-201ENSMUST00000194368 194 ntBASIC21.9■■□□□ 1.1
Csnka2ipQ8CH19 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Csnka2ipQ8CH19 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Csnka2ipQ8CH19 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Csnka2ipQ8CH19 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Csnka2ipQ8CH19 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Csnka2ipQ8CH19 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Csnka2ipQ8CH19 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Csnka2ipQ8CH19 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Csnka2ipQ8CH19 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.87■■□□□ 1.09
Csnka2ipQ8CH19 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Csnka2ipQ8CH19 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Csnka2ipQ8CH19 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.85■■□□□ 1.09
Csnka2ipQ8CH19 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.85■■□□□ 1.09
Csnka2ipQ8CH19 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Csnka2ipQ8CH19 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Csnka2ipQ8CH19 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Csnka2ipQ8CH19 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Csnka2ipQ8CH19 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Csnka2ipQ8CH19 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Csnka2ipQ8CH19 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.83■■□□□ 1.09
Csnka2ipQ8CH19 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.83■■□□□ 1.09
Csnka2ipQ8CH19 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Csnka2ipQ8CH19 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Csnka2ipQ8CH19 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Csnka2ipQ8CH19 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Csnka2ipQ8CH19 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Csnka2ipQ8CH19 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.8■■□□□ 1.08
Csnka2ipQ8CH19 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Csnka2ipQ8CH19 Gm4799-201ENSMUST00000095396 657 ntBASIC21.8■■□□□ 1.08
Csnka2ipQ8CH19 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Csnka2ipQ8CH19 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.79■■□□□ 1.08
Csnka2ipQ8CH19 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Csnka2ipQ8CH19 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Csnka2ipQ8CH19 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Csnka2ipQ8CH19 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Csnka2ipQ8CH19 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Csnka2ipQ8CH19 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Csnka2ipQ8CH19 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Csnka2ipQ8CH19 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Csnka2ipQ8CH19 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
Csnka2ipQ8CH19 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Csnka2ipQ8CH19 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Csnka2ipQ8CH19 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Csnka2ipQ8CH19 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Csnka2ipQ8CH19 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Csnka2ipQ8CH19 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Csnka2ipQ8CH19 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Csnka2ipQ8CH19 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Csnka2ipQ8CH19 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Csnka2ipQ8CH19 Gm45364-201ENSMUST00000210883 159 ntBASIC21.74■■□□□ 1.07
Csnka2ipQ8CH19 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Csnka2ipQ8CH19 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Csnka2ipQ8CH19 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.73■■□□□ 1.07
Csnka2ipQ8CH19 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Csnka2ipQ8CH19 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Csnka2ipQ8CH19 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Csnka2ipQ8CH19 Mir3960-201ENSMUST00000198213 73 ntBASIC21.72■■□□□ 1.07
Csnka2ipQ8CH19 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Csnka2ipQ8CH19 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Csnka2ipQ8CH19 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.72■■□□□ 1.07
Csnka2ipQ8CH19 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.71■■□□□ 1.07
Csnka2ipQ8CH19 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.71■■□□□ 1.07
Csnka2ipQ8CH19 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Csnka2ipQ8CH19 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.71■■□□□ 1.07
Csnka2ipQ8CH19 Mir6538-201ENSMUST00000183713 110 ntBASIC21.71■■□□□ 1.07
Csnka2ipQ8CH19 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Csnka2ipQ8CH19 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Csnka2ipQ8CH19 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Csnka2ipQ8CH19 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Csnka2ipQ8CH19 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Csnka2ipQ8CH19 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.7■■□□□ 1.06
Csnka2ipQ8CH19 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Csnka2ipQ8CH19 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Csnka2ipQ8CH19 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Csnka2ipQ8CH19 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.69■■□□□ 1.06
Csnka2ipQ8CH19 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Csnka2ipQ8CH19 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Csnka2ipQ8CH19 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Csnka2ipQ8CH19 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Csnka2ipQ8CH19 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Csnka2ipQ8CH19 Scarna2-201ENSMUST00000157560 414 ntBASIC21.68■■□□□ 1.06
Csnka2ipQ8CH19 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.68■■□□□ 1.06
Csnka2ipQ8CH19 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Csnka2ipQ8CH19 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Csnka2ipQ8CH19 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Csnka2ipQ8CH19 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Csnka2ipQ8CH19 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Csnka2ipQ8CH19 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Csnka2ipQ8CH19 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.66■■□□□ 1.06
Csnka2ipQ8CH19 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.66■■□□□ 1.06
Csnka2ipQ8CH19 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Csnka2ipQ8CH19 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Csnka2ipQ8CH19 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Csnka2ipQ8CH19 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Csnka2ipQ8CH19 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Csnka2ipQ8CH19 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms