Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Sox30Q8CGW4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Sox30Q8CGW4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Sox30Q8CGW4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sox30Q8CGW4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sox30Q8CGW4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Sox30Q8CGW4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.8■■□□□ 1.72
Sox30Q8CGW4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.8■■□□□ 1.72
Sox30Q8CGW4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sox30Q8CGW4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sox30Q8CGW4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.79■■□□□ 1.72
Sox30Q8CGW4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Sox30Q8CGW4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Sox30Q8CGW4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Sox30Q8CGW4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sox30Q8CGW4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sox30Q8CGW4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sox30Q8CGW4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sox30Q8CGW4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sox30Q8CGW4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sox30Q8CGW4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sox30Q8CGW4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Sox30Q8CGW4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sox30Q8CGW4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Sox30Q8CGW4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Sox30Q8CGW4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sox30Q8CGW4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Sox30Q8CGW4 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.72■■□□□ 1.71
Sox30Q8CGW4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Sox30Q8CGW4 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.7■■□□□ 1.71
Sox30Q8CGW4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sox30Q8CGW4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sox30Q8CGW4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sox30Q8CGW4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sox30Q8CGW4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sox30Q8CGW4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Sox30Q8CGW4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sox30Q8CGW4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.67■■□□□ 1.7
Sox30Q8CGW4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sox30Q8CGW4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sox30Q8CGW4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Sox30Q8CGW4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sox30Q8CGW4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Sox30Q8CGW4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Sox30Q8CGW4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC25.64■■□□□ 1.69
Sox30Q8CGW4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sox30Q8CGW4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.63■■□□□ 1.69
Sox30Q8CGW4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Sox30Q8CGW4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
Sox30Q8CGW4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sox30Q8CGW4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sox30Q8CGW4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Sox30Q8CGW4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Sox30Q8CGW4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sox30Q8CGW4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Sox30Q8CGW4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Sox30Q8CGW4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Sox30Q8CGW4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Sox30Q8CGW4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Sox30Q8CGW4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Sox30Q8CGW4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Sox30Q8CGW4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Sox30Q8CGW4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Sox30Q8CGW4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Sox30Q8CGW4 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.58■■□□□ 1.69
Sox30Q8CGW4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.58■■□□□ 1.68
Sox30Q8CGW4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sox30Q8CGW4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Sox30Q8CGW4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.56■■□□□ 1.68
Sox30Q8CGW4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Sox30Q8CGW4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sox30Q8CGW4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sox30Q8CGW4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sox30Q8CGW4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Sox30Q8CGW4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sox30Q8CGW4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sox30Q8CGW4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Sox30Q8CGW4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sox30Q8CGW4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Sox30Q8CGW4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sox30Q8CGW4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sox30Q8CGW4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Sox30Q8CGW4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.51■■□□□ 1.67
Sox30Q8CGW4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Sox30Q8CGW4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sox30Q8CGW4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Sox30Q8CGW4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sox30Q8CGW4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Sox30Q8CGW4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sox30Q8CGW4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sox30Q8CGW4 Gm17641-201ENSMUST00000166328 2350 ntBASIC25.48■■□□□ 1.67
Sox30Q8CGW4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sox30Q8CGW4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sox30Q8CGW4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sox30Q8CGW4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sox30Q8CGW4 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.46■■□□□ 1.67
Sox30Q8CGW4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sox30Q8CGW4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Sox30Q8CGW4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sox30Q8CGW4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms