Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.16■■□□□ 1.3
Pcdhb7Q8CDY9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb7Q8CDY9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb7Q8CDY9 Gm6821-201ENSMUST00000107540 542 ntBASIC23.15■■□□□ 1.3
Pcdhb7Q8CDY9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb7Q8CDY9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb7Q8CDY9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb7Q8CDY9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb7Q8CDY9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb7Q8CDY9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb7Q8CDY9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb7Q8CDY9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb7Q8CDY9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.07■■□□□ 1.28
Pcdhb7Q8CDY9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhb7Q8CDY9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdhb7Q8CDY9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb7Q8CDY9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb7Q8CDY9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb7Q8CDY9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Pcdhb7Q8CDY9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb7Q8CDY9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb7Q8CDY9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb7Q8CDY9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb7Q8CDY9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb7Q8CDY9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhb7Q8CDY9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb7Q8CDY9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdhb7Q8CDY9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb7Q8CDY9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Gm8503-201ENSMUST00000118131 455 ntBASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb7Q8CDY9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Pcdhb7Q8CDY9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb7Q8CDY9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb7Q8CDY9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.95■■□□□ 1.26
Pcdhb7Q8CDY9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb7Q8CDY9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.94■■□□□ 1.26
Pcdhb7Q8CDY9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Particl-201ENSMUST00000205370 1560 ntBASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb7Q8CDY9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.92■■□□□ 1.26
Pcdhb7Q8CDY9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb7Q8CDY9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb7Q8CDY9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.89■■□□□ 1.25
Pcdhb7Q8CDY9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms