Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb7Q8CDY9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.16■■□□□ 1.3
Pcdhb7Q8CDY9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb7Q8CDY9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb7Q8CDY9 Gm6821-201ENSMUST00000107540 542 ntBASIC23.15■■□□□ 1.3
Pcdhb7Q8CDY9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb7Q8CDY9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb7Q8CDY9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb7Q8CDY9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb7Q8CDY9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb7Q8CDY9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb7Q8CDY9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.1■■□□□ 1.29
Pcdhb7Q8CDY9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb7Q8CDY9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb7Q8CDY9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb7Q8CDY9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb7Q8CDY9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.07■■□□□ 1.28
Pcdhb7Q8CDY9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhb7Q8CDY9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.06■■□□□ 1.28
Pcdhb7Q8CDY9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb7Q8CDY9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb7Q8CDY9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb7Q8CDY9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb7Q8CDY9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Pcdhb7Q8CDY9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb7Q8CDY9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb7Q8CDY9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb7Q8CDY9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb7Q8CDY9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb7Q8CDY9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhb7Q8CDY9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb7Q8CDY9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdhb7Q8CDY9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb7Q8CDY9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Gm8503-201ENSMUST00000118131 455 ntBASIC22.99■■□□□ 1.27
Pcdhb7Q8CDY9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb7Q8CDY9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Pcdhb7Q8CDY9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb7Q8CDY9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb7Q8CDY9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb7Q8CDY9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb7Q8CDY9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.95■■□□□ 1.26
Pcdhb7Q8CDY9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb7Q8CDY9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.94■■□□□ 1.26
Pcdhb7Q8CDY9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Particl-201ENSMUST00000205370 1560 ntBASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb7Q8CDY9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb7Q8CDY9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.92■■□□□ 1.26
Pcdhb7Q8CDY9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb7Q8CDY9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb7Q8CDY9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb7Q8CDY9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb7Q8CDY9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.89■■□□□ 1.25
Pcdhb7Q8CDY9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms