Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Pabpn1Q8CCS6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
Pabpn1Q8CCS6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Pabpn1Q8CCS6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC38.22■■■■□ 3.71
Pabpn1Q8CCS6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
Pabpn1Q8CCS6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC38.21■■■■□ 3.71
Pabpn1Q8CCS6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC38.21■■■■□ 3.71
Pabpn1Q8CCS6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
Pabpn1Q8CCS6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC38.19■■■■□ 3.7
Pabpn1Q8CCS6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Pabpn1Q8CCS6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC38.19■■■■□ 3.7
Pabpn1Q8CCS6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
Pabpn1Q8CCS6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC38.18■■■■□ 3.7
Pabpn1Q8CCS6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC38.18■■■■□ 3.7
Pabpn1Q8CCS6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC38.17■■■■□ 3.7
Pabpn1Q8CCS6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Pabpn1Q8CCS6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC38.17■■■■□ 3.7
Pabpn1Q8CCS6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Pabpn1Q8CCS6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
Pabpn1Q8CCS6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
Pabpn1Q8CCS6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
Pabpn1Q8CCS6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Pabpn1Q8CCS6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
Pabpn1Q8CCS6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Pabpn1Q8CCS6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Pabpn1Q8CCS6 Pcf11-205ENSMUST00000208255 1720 ntBASIC38.12■■■■□ 3.69
Pabpn1Q8CCS6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
Pabpn1Q8CCS6 Gm13238-201ENSMUST00000117655 780 ntBASIC38.11■■■■□ 3.69
Pabpn1Q8CCS6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC38.11■■■■□ 3.69
Pabpn1Q8CCS6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
Pabpn1Q8CCS6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Pabpn1Q8CCS6 Gm37136-201ENSMUST00000194368 194 ntBASIC38.09■■■■□ 3.69
Pabpn1Q8CCS6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC38.08■■■■□ 3.69
Pabpn1Q8CCS6 Gm9959-201ENSMUST00000068277 390 ntBASIC38.08■■■■□ 3.69
Pabpn1Q8CCS6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
Pabpn1Q8CCS6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
Pabpn1Q8CCS6 Gm43566-201ENSMUST00000196851 808 ntBASIC38.07■■■■□ 3.68
Pabpn1Q8CCS6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
Pabpn1Q8CCS6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC38.06■■■■□ 3.68
Pabpn1Q8CCS6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
Pabpn1Q8CCS6 Gm45444-201ENSMUST00000211394 898 ntBASIC38.05■■■■□ 3.68
Pabpn1Q8CCS6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Pabpn1Q8CCS6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC38.04■■■■□ 3.68
Pabpn1Q8CCS6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC38.04■■■■□ 3.68
Pabpn1Q8CCS6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
Pabpn1Q8CCS6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC38.02■■■■□ 3.68
Pabpn1Q8CCS6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Pabpn1Q8CCS6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC38.02■■■■□ 3.68
Pabpn1Q8CCS6 Gm42501-201ENSMUST00000200220 1026 ntBASIC38.01■■■■□ 3.68
Pabpn1Q8CCS6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC38■■■■□ 3.67
Pabpn1Q8CCS6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC37.99■■■■□ 3.67
Pabpn1Q8CCS6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC37.98■■■■□ 3.67
Pabpn1Q8CCS6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Pabpn1Q8CCS6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Pabpn1Q8CCS6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
Pabpn1Q8CCS6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Pabpn1Q8CCS6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Pabpn1Q8CCS6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
Pabpn1Q8CCS6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC37.95■■■■□ 3.67
Pabpn1Q8CCS6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Pabpn1Q8CCS6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC37.95■■■■□ 3.67
Pabpn1Q8CCS6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.66
Pabpn1Q8CCS6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Pabpn1Q8CCS6 Gm9812-201ENSMUST00000061934 968 ntBASIC37.94■■■■□ 3.66
Pabpn1Q8CCS6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC37.93■■■■□ 3.66
Pabpn1Q8CCS6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC37.92■■■■□ 3.66
Pabpn1Q8CCS6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC37.92■■■■□ 3.66
Pabpn1Q8CCS6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Pabpn1Q8CCS6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC37.91■■■■□ 3.66
Pabpn1Q8CCS6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC37.9■■■■□ 3.66
Pabpn1Q8CCS6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC37.9■■■■□ 3.66
Pabpn1Q8CCS6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC37.9■■■■□ 3.66
Pabpn1Q8CCS6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC37.9■■■■□ 3.66
Pabpn1Q8CCS6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC37.89■■■■□ 3.66
Pabpn1Q8CCS6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
Pabpn1Q8CCS6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC37.89■■■■□ 3.66
Pabpn1Q8CCS6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC37.88■■■■□ 3.65
Pabpn1Q8CCS6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC37.88■■■■□ 3.65
Pabpn1Q8CCS6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC37.87■■■■□ 3.65
Pabpn1Q8CCS6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
Pabpn1Q8CCS6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC37.86■■■■□ 3.65
Pabpn1Q8CCS6 Nsd1-203ENSMUST00000224156 1149 ntBASIC37.86■■■■□ 3.65
Pabpn1Q8CCS6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
Pabpn1Q8CCS6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
Pabpn1Q8CCS6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC37.86■■■■□ 3.65
Pabpn1Q8CCS6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC37.85■■■■□ 3.65
Pabpn1Q8CCS6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC37.85■■■■□ 3.65
Pabpn1Q8CCS6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC37.84■■■■□ 3.65
Pabpn1Q8CCS6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Pabpn1Q8CCS6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC37.82■■■■□ 3.64
Pabpn1Q8CCS6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
Pabpn1Q8CCS6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC37.81■■■■□ 3.64
Pabpn1Q8CCS6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
Pabpn1Q8CCS6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Pabpn1Q8CCS6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC37.8■■■■□ 3.64
Pabpn1Q8CCS6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
Pabpn1Q8CCS6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC37.79■■■■□ 3.64
Pabpn1Q8CCS6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC37.79■■■■□ 3.64
Pabpn1Q8CCS6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Pabpn1Q8CCS6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms