Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.62■■□□□ 1.53
Brat1Q8C3R1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.62■■□□□ 1.53
Brat1Q8C3R1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Brat1Q8C3R1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Brat1Q8C3R1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Brat1Q8C3R1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.6■■□□□ 1.53
Brat1Q8C3R1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Brat1Q8C3R1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.59■■□□□ 1.53
Brat1Q8C3R1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Brat1Q8C3R1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Brat1Q8C3R1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Brat1Q8C3R1 Gm4799-201ENSMUST00000095396 657 ntBASIC24.59■■□□□ 1.53
Brat1Q8C3R1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Brat1Q8C3R1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Brat1Q8C3R1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.57■■□□□ 1.52
Brat1Q8C3R1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.57■■□□□ 1.52
Brat1Q8C3R1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Brat1Q8C3R1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Brat1Q8C3R1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Brat1Q8C3R1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Brat1Q8C3R1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Brat1Q8C3R1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.55■■□□□ 1.52
Brat1Q8C3R1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Brat1Q8C3R1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Brat1Q8C3R1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Brat1Q8C3R1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Brat1Q8C3R1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Brat1Q8C3R1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Brat1Q8C3R1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Brat1Q8C3R1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Brat1Q8C3R1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Brat1Q8C3R1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Brat1Q8C3R1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Brat1Q8C3R1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Brat1Q8C3R1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Brat1Q8C3R1 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.5■■□□□ 1.51
Brat1Q8C3R1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
Brat1Q8C3R1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Brat1Q8C3R1 Mir3960-201ENSMUST00000198213 73 ntBASIC24.49■■□□□ 1.51
Brat1Q8C3R1 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.49■■□□□ 1.51
Brat1Q8C3R1 Gm6311-201ENSMUST00000073790 878 ntBASIC24.49■■□□□ 1.51
Brat1Q8C3R1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
Brat1Q8C3R1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Brat1Q8C3R1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.48■■□□□ 1.51
Brat1Q8C3R1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Brat1Q8C3R1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Brat1Q8C3R1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Brat1Q8C3R1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.47■■□□□ 1.51
Brat1Q8C3R1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Brat1Q8C3R1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Brat1Q8C3R1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.46■■□□□ 1.51
Brat1Q8C3R1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.46■■□□□ 1.51
Brat1Q8C3R1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.46■■□□□ 1.51
Brat1Q8C3R1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.45■■□□□ 1.51
Brat1Q8C3R1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.45■■□□□ 1.5
Brat1Q8C3R1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Brat1Q8C3R1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Brat1Q8C3R1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Brat1Q8C3R1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Brat1Q8C3R1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Brat1Q8C3R1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Brat1Q8C3R1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Brat1Q8C3R1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Brat1Q8C3R1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Brat1Q8C3R1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Brat1Q8C3R1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Brat1Q8C3R1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.42■■□□□ 1.5
Brat1Q8C3R1 Gm45364-201ENSMUST00000210883 159 ntBASIC24.42■■□□□ 1.5
Brat1Q8C3R1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Brat1Q8C3R1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Brat1Q8C3R1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Brat1Q8C3R1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.41■■□□□ 1.5
Brat1Q8C3R1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Brat1Q8C3R1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Brat1Q8C3R1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Brat1Q8C3R1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Brat1Q8C3R1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Brat1Q8C3R1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.39■■□□□ 1.49
Brat1Q8C3R1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Brat1Q8C3R1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Brat1Q8C3R1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Brat1Q8C3R1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Brat1Q8C3R1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Brat1Q8C3R1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Brat1Q8C3R1 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.37■■□□□ 1.49
Brat1Q8C3R1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.37■■□□□ 1.49
Brat1Q8C3R1 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.37■■□□□ 1.49
Brat1Q8C3R1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Brat1Q8C3R1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.36■■□□□ 1.49
Brat1Q8C3R1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Brat1Q8C3R1 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.35■■□□□ 1.49
Brat1Q8C3R1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Brat1Q8C3R1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Brat1Q8C3R1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Brat1Q8C3R1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Brat1Q8C3R1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Brat1Q8C3R1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Brat1Q8C3R1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Brat1Q8C3R1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Brat1Q8C3R1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms