Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1aQ8BVF7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Aph1aQ8BVF7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Aph1aQ8BVF7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Aph1aQ8BVF7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Aph1aQ8BVF7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1aQ8BVF7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.44■□□□□ 0.86
Aph1aQ8BVF7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1aQ8BVF7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1aQ8BVF7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Aph1aQ8BVF7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Aph1aQ8BVF7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Aph1aQ8BVF7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Aph1aQ8BVF7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.42■□□□□ 0.86
Aph1aQ8BVF7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.42■□□□□ 0.86
Aph1aQ8BVF7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.42■□□□□ 0.86
Aph1aQ8BVF7 Gm4799-201ENSMUST00000095396 657 ntBASIC20.42■□□□□ 0.86
Aph1aQ8BVF7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1aQ8BVF7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Aph1aQ8BVF7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.41■□□□□ 0.86
Aph1aQ8BVF7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Aph1aQ8BVF7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1aQ8BVF7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1aQ8BVF7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1aQ8BVF7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1aQ8BVF7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1aQ8BVF7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Aph1aQ8BVF7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Aph1aQ8BVF7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Aph1aQ8BVF7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Aph1aQ8BVF7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Aph1aQ8BVF7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Aph1aQ8BVF7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Aph1aQ8BVF7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1aQ8BVF7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.38■□□□□ 0.85
Aph1aQ8BVF7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1aQ8BVF7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Aph1aQ8BVF7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Aph1aQ8BVF7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Aph1aQ8BVF7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Aph1aQ8BVF7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.37■□□□□ 0.85
Aph1aQ8BVF7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1aQ8BVF7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1aQ8BVF7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1aQ8BVF7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Aph1aQ8BVF7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Aph1aQ8BVF7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Aph1aQ8BVF7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.36■□□□□ 0.85
Aph1aQ8BVF7 Gm6311-201ENSMUST00000073790 878 ntBASIC20.36■□□□□ 0.85
Aph1aQ8BVF7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Aph1aQ8BVF7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aph1aQ8BVF7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aph1aQ8BVF7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aph1aQ8BVF7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aph1aQ8BVF7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Aph1aQ8BVF7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aph1aQ8BVF7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Aph1aQ8BVF7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Aph1aQ8BVF7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Aph1aQ8BVF7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.33■□□□□ 0.85
Aph1aQ8BVF7 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.33■□□□□ 0.85
Aph1aQ8BVF7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Aph1aQ8BVF7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Aph1aQ8BVF7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.32■□□□□ 0.84
Aph1aQ8BVF7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Aph1aQ8BVF7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Aph1aQ8BVF7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.32■□□□□ 0.84
Aph1aQ8BVF7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Aph1aQ8BVF7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Aph1aQ8BVF7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Aph1aQ8BVF7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Aph1aQ8BVF7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Aph1aQ8BVF7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Aph1aQ8BVF7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Aph1aQ8BVF7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.3■□□□□ 0.84
Aph1aQ8BVF7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.3■□□□□ 0.84
Aph1aQ8BVF7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
Aph1aQ8BVF7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aph1aQ8BVF7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.29■□□□□ 0.84
Aph1aQ8BVF7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Aph1aQ8BVF7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Aph1aQ8BVF7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Aph1aQ8BVF7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.28■□□□□ 0.84
Aph1aQ8BVF7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Aph1aQ8BVF7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Aph1aQ8BVF7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.27■□□□□ 0.84
Aph1aQ8BVF7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Aph1aQ8BVF7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Aph1aQ8BVF7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Aph1aQ8BVF7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Aph1aQ8BVF7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Aph1aQ8BVF7 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Aph1aQ8BVF7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Aph1aQ8BVF7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Aph1aQ8BVF7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Aph1aQ8BVF7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.25■□□□□ 0.83
Aph1aQ8BVF7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Aph1aQ8BVF7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Aph1aQ8BVF7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Aph1aQ8BVF7 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms