Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Tdp1Q8BJ37 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tdp1Q8BJ37 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Tdp1Q8BJ37 Gm27502-201ENSMUST00000183495 199 ntBASIC26.2■■□□□ 1.78
Tdp1Q8BJ37 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Tdp1Q8BJ37 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Tdp1Q8BJ37 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tdp1Q8BJ37 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tdp1Q8BJ37 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Tdp1Q8BJ37 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tdp1Q8BJ37 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
Tdp1Q8BJ37 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Tdp1Q8BJ37 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tdp1Q8BJ37 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Tdp1Q8BJ37 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tdp1Q8BJ37 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Gm7332-201ENSMUST00000118351 454 ntBASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tdp1Q8BJ37 Gm9812-201ENSMUST00000061934 968 ntBASIC26.08■■□□□ 1.77
Tdp1Q8BJ37 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.06■■□□□ 1.76
Tdp1Q8BJ37 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Tdp1Q8BJ37 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Tdp1Q8BJ37 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Tdp1Q8BJ37 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Tdp1Q8BJ37 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Tdp1Q8BJ37 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tdp1Q8BJ37 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tdp1Q8BJ37 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Tdp1Q8BJ37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Gm14523-201ENSMUST00000117260 558 ntBASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Tdp1Q8BJ37 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Tdp1Q8BJ37 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.97■■□□□ 1.75
Tdp1Q8BJ37 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Tdp1Q8BJ37 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.91■■□□□ 1.74
Tdp1Q8BJ37 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.91■■□□□ 1.74
Tdp1Q8BJ37 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Tdp1Q8BJ37 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms