Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tdp1Q8BJ37 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Tdp1Q8BJ37 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tdp1Q8BJ37 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Tdp1Q8BJ37 Gm27502-201ENSMUST00000183495 199 ntBASIC26.2■■□□□ 1.78
Tdp1Q8BJ37 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Tdp1Q8BJ37 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Tdp1Q8BJ37 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tdp1Q8BJ37 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tdp1Q8BJ37 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Tdp1Q8BJ37 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tdp1Q8BJ37 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
Tdp1Q8BJ37 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Tdp1Q8BJ37 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tdp1Q8BJ37 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.14■■□□□ 1.78
Tdp1Q8BJ37 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Tdp1Q8BJ37 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tdp1Q8BJ37 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Tdp1Q8BJ37 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tdp1Q8BJ37 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tdp1Q8BJ37 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Gm7332-201ENSMUST00000118351 454 ntBASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tdp1Q8BJ37 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Tdp1Q8BJ37 Gm9812-201ENSMUST00000061934 968 ntBASIC26.08■■□□□ 1.77
Tdp1Q8BJ37 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.07■■□□□ 1.76
Tdp1Q8BJ37 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.06■■□□□ 1.76
Tdp1Q8BJ37 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Tdp1Q8BJ37 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Tdp1Q8BJ37 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Tdp1Q8BJ37 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Tdp1Q8BJ37 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Tdp1Q8BJ37 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tdp1Q8BJ37 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tdp1Q8BJ37 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tdp1Q8BJ37 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Tdp1Q8BJ37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tdp1Q8BJ37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Gm14523-201ENSMUST00000117260 558 ntBASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Tdp1Q8BJ37 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Tdp1Q8BJ37 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Tdp1Q8BJ37 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.97■■□□□ 1.75
Tdp1Q8BJ37 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Tdp1Q8BJ37 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tdp1Q8BJ37 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.93■■□□□ 1.74
Tdp1Q8BJ37 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tdp1Q8BJ37 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.91■■□□□ 1.74
Tdp1Q8BJ37 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.91■■□□□ 1.74
Tdp1Q8BJ37 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Tdp1Q8BJ37 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms