Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc5a7Q8BGY9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.39■□□□□ 0.85
Slc5a7Q8BGY9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc5a7Q8BGY9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc5a7Q8BGY9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc5a7Q8BGY9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.33■□□□□ 0.85
Slc5a7Q8BGY9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Slc5a7Q8BGY9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc5a7Q8BGY9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slc5a7Q8BGY9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Gm26115-201ENSMUST00000175605 87 ntBASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc5a7Q8BGY9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc5a7Q8BGY9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc5a7Q8BGY9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc5a7Q8BGY9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc5a7Q8BGY9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc5a7Q8BGY9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc5a7Q8BGY9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc5a7Q8BGY9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc5a7Q8BGY9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc5a7Q8BGY9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc5a7Q8BGY9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc5a7Q8BGY9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc5a7Q8BGY9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms