Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC37.37■■■■□ 3.57
Rpap1Q80TE0 AC151971.4-201ENSMUST00000214717 704 ntBASIC37.36■■■■□ 3.57
Rpap1Q80TE0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC37.35■■■■□ 3.57
Rpap1Q80TE0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC37.35■■■■□ 3.57
Rpap1Q80TE0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC37.34■■■■□ 3.57
Rpap1Q80TE0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Rpap1Q80TE0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC37.32■■■■□ 3.56
Rpap1Q80TE0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Rpap1Q80TE0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Rpap1Q80TE0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC37.29■■■■□ 3.56
Rpap1Q80TE0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC37.29■■■■□ 3.56
Rpap1Q80TE0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC37.29■■■■□ 3.56
Rpap1Q80TE0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC37.27■■■■□ 3.56
Rpap1Q80TE0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
Rpap1Q80TE0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC37.26■■■■□ 3.55
Rpap1Q80TE0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC37.25■■■■□ 3.55
Rpap1Q80TE0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC37.25■■■■□ 3.55
Rpap1Q80TE0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Rpap1Q80TE0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC37.25■■■■□ 3.55
Rpap1Q80TE0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC37.24■■■■□ 3.55
Rpap1Q80TE0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC37.23■■■■□ 3.55
Rpap1Q80TE0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Rpap1Q80TE0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC37.23■■■■□ 3.55
Rpap1Q80TE0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC37.23■■■■□ 3.55
Rpap1Q80TE0 Gm9910-201ENSMUST00000195385 1550 ntBASIC37.22■■■■□ 3.55
Rpap1Q80TE0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC37.22■■■■□ 3.55
Rpap1Q80TE0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC37.22■■■■□ 3.55
Rpap1Q80TE0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
Rpap1Q80TE0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Rpap1Q80TE0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC37.21■■■■□ 3.55
Rpap1Q80TE0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Rpap1Q80TE0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC37.21■■■■□ 3.55
Rpap1Q80TE0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC37.2■■■■□ 3.55
Rpap1Q80TE0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Rpap1Q80TE0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
Rpap1Q80TE0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
Rpap1Q80TE0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
Rpap1Q80TE0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC37.18■■■■□ 3.54
Rpap1Q80TE0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC37.18■■■■□ 3.54
Rpap1Q80TE0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC37.18■■■■□ 3.54
Rpap1Q80TE0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Rpap1Q80TE0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC37.17■■■■□ 3.54
Rpap1Q80TE0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC37.17■■■■□ 3.54
Rpap1Q80TE0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC37.16■■■■□ 3.54
Rpap1Q80TE0 Gm9812-201ENSMUST00000061934 968 ntBASIC37.16■■■■□ 3.54
Rpap1Q80TE0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Rpap1Q80TE0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
Rpap1Q80TE0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC37.14■■■■□ 3.54
Rpap1Q80TE0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC37.14■■■■□ 3.54
Rpap1Q80TE0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rpap1Q80TE0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rpap1Q80TE0 Zxda-201ENSMUST00000117281 2621 ntBASIC37.13■■■■□ 3.53
Rpap1Q80TE0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Rpap1Q80TE0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Rpap1Q80TE0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
Rpap1Q80TE0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC37.12■■■■□ 3.53
Rpap1Q80TE0 Gm5067-201ENSMUST00000170449 1009 ntBASIC37.11■■■■□ 3.53
Rpap1Q80TE0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
Rpap1Q80TE0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC37.11■■■■□ 3.53
Rpap1Q80TE0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC37.1■■■■□ 3.53
Rpap1Q80TE0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rpap1Q80TE0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rpap1Q80TE0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rpap1Q80TE0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC37.09■■■■□ 3.53
Rpap1Q80TE0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC37.09■■■■□ 3.53
Rpap1Q80TE0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC37.07■■■■□ 3.52
Rpap1Q80TE0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Rpap1Q80TE0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC37.06■■■■□ 3.52
Rpap1Q80TE0 Gm5812-201ENSMUST00000061073 957 ntBASIC37.06■■■■□ 3.52
Rpap1Q80TE0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Rpap1Q80TE0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Rpap1Q80TE0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Rpap1Q80TE0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
Rpap1Q80TE0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Rpap1Q80TE0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Rpap1Q80TE0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC37.03■■■■□ 3.52
Rpap1Q80TE0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Rpap1Q80TE0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC37.02■■■■□ 3.52
Rpap1Q80TE0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Rpap1Q80TE0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
Rpap1Q80TE0 Gm10420-201ENSMUST00000121713 882 ntBASIC37.01■■■■□ 3.51
Rpap1Q80TE0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
Rpap1Q80TE0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC37■■■■□ 3.51
Rpap1Q80TE0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC37■■■■□ 3.51
Rpap1Q80TE0 Gm22567-201ENSMUST00000175542 342 ntBASIC37■■■■□ 3.51
Rpap1Q80TE0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Rpap1Q80TE0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC36.98■■■■□ 3.51
Rpap1Q80TE0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC36.98■■■■□ 3.51
Rpap1Q80TE0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
Rpap1Q80TE0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
Rpap1Q80TE0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Rpap1Q80TE0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
Rpap1Q80TE0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
Rpap1Q80TE0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Rpap1Q80TE0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
Rpap1Q80TE0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC36.93■■■■□ 3.5
Rpap1Q80TE0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Rpap1Q80TE0 Gm14121-201ENSMUST00000121441 1380 ntBASIC36.93■■■■□ 3.5
Rpap1Q80TE0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC36.93■■■■□ 3.5
Rpap1Q80TE0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC36.93■■■■□ 3.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms