Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.3■■□□□ 1.96
Ddx55Q6ZPL9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.29■■□□□ 1.96
Ddx55Q6ZPL9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx55Q6ZPL9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ddx55Q6ZPL9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Ddx55Q6ZPL9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Ddx55Q6ZPL9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.28■■□□□ 1.96
Ddx55Q6ZPL9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ddx55Q6ZPL9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Ddx55Q6ZPL9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx55Q6ZPL9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx55Q6ZPL9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx55Q6ZPL9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ddx55Q6ZPL9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.26■■□□□ 1.95
Ddx55Q6ZPL9 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.26■■□□□ 1.95
Ddx55Q6ZPL9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.25■■□□□ 1.95
Ddx55Q6ZPL9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx55Q6ZPL9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx55Q6ZPL9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ddx55Q6ZPL9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.24■■□□□ 1.95
Ddx55Q6ZPL9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx55Q6ZPL9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ddx55Q6ZPL9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Ddx55Q6ZPL9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx55Q6ZPL9 Gm9812-201ENSMUST00000061934 968 ntBASIC27.23■■□□□ 1.95
Ddx55Q6ZPL9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ddx55Q6ZPL9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.22■■□□□ 1.95
Ddx55Q6ZPL9 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.22■■□□□ 1.95
Ddx55Q6ZPL9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
Ddx55Q6ZPL9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx55Q6ZPL9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
Ddx55Q6ZPL9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.2■■□□□ 1.94
Ddx55Q6ZPL9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
Ddx55Q6ZPL9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.2■■□□□ 1.94
Ddx55Q6ZPL9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx55Q6ZPL9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx55Q6ZPL9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx55Q6ZPL9 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.94
Ddx55Q6ZPL9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Ddx55Q6ZPL9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx55Q6ZPL9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx55Q6ZPL9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx55Q6ZPL9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Ddx55Q6ZPL9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.14■■□□□ 1.94
Ddx55Q6ZPL9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx55Q6ZPL9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.93
Ddx55Q6ZPL9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.14■■□□□ 1.93
Ddx55Q6ZPL9 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.13■■□□□ 1.93
Ddx55Q6ZPL9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
Ddx55Q6ZPL9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx55Q6ZPL9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.12■■□□□ 1.93
Ddx55Q6ZPL9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx55Q6ZPL9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx55Q6ZPL9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx55Q6ZPL9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx55Q6ZPL9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx55Q6ZPL9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx55Q6ZPL9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.1■■□□□ 1.93
Ddx55Q6ZPL9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
Ddx55Q6ZPL9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx55Q6ZPL9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.09■■□□□ 1.93
Ddx55Q6ZPL9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx55Q6ZPL9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx55Q6ZPL9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx55Q6ZPL9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Ddx55Q6ZPL9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.08■■□□□ 1.92
Ddx55Q6ZPL9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx55Q6ZPL9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.07■■□□□ 1.92
Ddx55Q6ZPL9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx55Q6ZPL9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx55Q6ZPL9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.06■■□□□ 1.92
Ddx55Q6ZPL9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx55Q6ZPL9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx55Q6ZPL9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC27.05■■□□□ 1.92
Ddx55Q6ZPL9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx55Q6ZPL9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Ddx55Q6ZPL9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx55Q6ZPL9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx55Q6ZPL9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx55Q6ZPL9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx55Q6ZPL9 Gm10420-201ENSMUST00000121713 882 ntBASIC27.04■■□□□ 1.92
Ddx55Q6ZPL9 Zxda-201ENSMUST00000117281 2621 ntBASIC27.03■■□□□ 1.92
Ddx55Q6ZPL9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx55Q6ZPL9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx55Q6ZPL9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx55Q6ZPL9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Ddx55Q6ZPL9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx55Q6ZPL9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ddx55Q6ZPL9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.92
Ddx55Q6ZPL9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx55Q6ZPL9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx55Q6ZPL9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx55Q6ZPL9 Gm5812-201ENSMUST00000061073 957 ntBASIC27.01■■□□□ 1.91
Ddx55Q6ZPL9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx55Q6ZPL9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27■■□□□ 1.91
Ddx55Q6ZPL9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.98■■□□□ 1.91
Ddx55Q6ZPL9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ddx55Q6ZPL9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.97■■□□□ 1.91
Ddx55Q6ZPL9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Ddx55Q6ZPL9 Gm5921-201ENSMUST00000075898 882 ntBASIC26.97■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms