Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Rnf220Q6PDX6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf220Q6PDX6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Rnf220Q6PDX6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf220Q6PDX6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf220Q6PDX6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.87■■□□□ 1.09
Rnf220Q6PDX6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf220Q6PDX6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf220Q6PDX6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf220Q6PDX6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Rnf220Q6PDX6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Rnf220Q6PDX6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf220Q6PDX6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf220Q6PDX6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Rnf220Q6PDX6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Rnf220Q6PDX6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Rnf220Q6PDX6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf220Q6PDX6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf220Q6PDX6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Rnf220Q6PDX6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Rnf220Q6PDX6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf220Q6PDX6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Rnf220Q6PDX6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf220Q6PDX6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Rnf220Q6PDX6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf220Q6PDX6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Rnf220Q6PDX6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
Rnf220Q6PDX6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf220Q6PDX6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf220Q6PDX6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf220Q6PDX6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Rnf220Q6PDX6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf220Q6PDX6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf220Q6PDX6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf220Q6PDX6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf220Q6PDX6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf220Q6PDX6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf220Q6PDX6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf220Q6PDX6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Rnf220Q6PDX6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf220Q6PDX6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.8■■□□□ 1.08
Rnf220Q6PDX6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf220Q6PDX6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf220Q6PDX6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf220Q6PDX6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf220Q6PDX6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf220Q6PDX6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf220Q6PDX6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf220Q6PDX6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf220Q6PDX6 Gm16148-201ENSMUST00000119653 893 ntBASIC21.75■■□□□ 1.07
Rnf220Q6PDX6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf220Q6PDX6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf220Q6PDX6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Rnf220Q6PDX6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.75■■□□□ 1.07
Rnf220Q6PDX6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf220Q6PDX6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf220Q6PDX6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf220Q6PDX6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf220Q6PDX6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf220Q6PDX6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.73■■□□□ 1.07
Rnf220Q6PDX6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf220Q6PDX6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rnf220Q6PDX6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Rnf220Q6PDX6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf220Q6PDX6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf220Q6PDX6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf220Q6PDX6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf220Q6PDX6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf220Q6PDX6 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.71■■□□□ 1.07
Rnf220Q6PDX6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rnf220Q6PDX6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Rnf220Q6PDX6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Rnf220Q6PDX6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf220Q6PDX6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.7■■□□□ 1.06
Rnf220Q6PDX6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf220Q6PDX6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf220Q6PDX6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf220Q6PDX6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Rnf220Q6PDX6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf220Q6PDX6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf220Q6PDX6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf220Q6PDX6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf220Q6PDX6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf220Q6PDX6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf220Q6PDX6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf220Q6PDX6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms