Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3aQ6PCM1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3aQ6PCM1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Gm45364-201ENSMUST00000210883 159 ntBASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kdm3aQ6PCM1 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.36■■■□□ 2.13
Kdm3aQ6PCM1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Kdm3aQ6PCM1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Kdm3aQ6PCM1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Kdm3aQ6PCM1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Kdm3aQ6PCM1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Kdm3aQ6PCM1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Kdm3aQ6PCM1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Kdm3aQ6PCM1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Kdm3aQ6PCM1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Gm11175-201ENSMUST00000116172 543 ntBASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Mir6538-201ENSMUST00000183713 110 ntBASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.31■■■□□ 2.12
Kdm3aQ6PCM1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kdm3aQ6PCM1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Kdm3aQ6PCM1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.28■■■□□ 2.12
Kdm3aQ6PCM1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Kdm3aQ6PCM1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Kdm3aQ6PCM1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Kdm3aQ6PCM1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kdm3aQ6PCM1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Kdm3aQ6PCM1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Gm9812-201ENSMUST00000061934 968 ntBASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Kdm3aQ6PCM1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Kdm3aQ6PCM1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
Kdm3aQ6PCM1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.19■■■□□ 2.1
Kdm3aQ6PCM1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Kdm3aQ6PCM1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Kdm3aQ6PCM1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Kdm3aQ6PCM1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Kdm3aQ6PCM1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Kdm3aQ6PCM1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Scarna2-201ENSMUST00000157560 414 ntBASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Gm9806-201ENSMUST00000051080 552 ntBASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Kdm3aQ6PCM1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Kdm3aQ6PCM1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.15■■■□□ 2.1
Kdm3aQ6PCM1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Kdm3aQ6PCM1 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.15■■■□□ 2.1
Kdm3aQ6PCM1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Kdm3aQ6PCM1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Kdm3aQ6PCM1 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.14■■■□□ 2.09
Kdm3aQ6PCM1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
Kdm3aQ6PCM1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Kdm3aQ6PCM1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Kdm3aQ6PCM1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
Kdm3aQ6PCM1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Kdm3aQ6PCM1 Gm11687-201ENSMUST00000118911 886 ntBASIC28.12■■■□□ 2.09
Kdm3aQ6PCM1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Kdm3aQ6PCM1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.1■■■□□ 2.09
Kdm3aQ6PCM1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Kdm3aQ6PCM1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Kdm3aQ6PCM1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Kdm3aQ6PCM1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Kdm3aQ6PCM1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Kdm3aQ6PCM1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Kdm3aQ6PCM1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms