Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Abcf1Q6P542 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Abcf1Q6P542 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Abcf1Q6P542 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Abcf1Q6P542 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Abcf1Q6P542 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Abcf1Q6P542 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.86■■□□□ 1.73
Abcf1Q6P542 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Abcf1Q6P542 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Abcf1Q6P542 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Abcf1Q6P542 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Abcf1Q6P542 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.84■■□□□ 1.73
Abcf1Q6P542 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Abcf1Q6P542 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
Abcf1Q6P542 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Abcf1Q6P542 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Abcf1Q6P542 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Abcf1Q6P542 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Abcf1Q6P542 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Abcf1Q6P542 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
Abcf1Q6P542 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Abcf1Q6P542 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Abcf1Q6P542 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Abcf1Q6P542 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Abcf1Q6P542 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Abcf1Q6P542 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Abcf1Q6P542 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Abcf1Q6P542 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Abcf1Q6P542 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Abcf1Q6P542 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.79■■□□□ 1.72
Abcf1Q6P542 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Abcf1Q6P542 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Abcf1Q6P542 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Abcf1Q6P542 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Abcf1Q6P542 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Abcf1Q6P542 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Abcf1Q6P542 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Abcf1Q6P542 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.76■■□□□ 1.71
Abcf1Q6P542 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Abcf1Q6P542 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Abcf1Q6P542 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Abcf1Q6P542 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Abcf1Q6P542 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Abcf1Q6P542 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Abcf1Q6P542 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Abcf1Q6P542 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Abcf1Q6P542 Gm6821-201ENSMUST00000107540 542 ntBASIC25.73■■□□□ 1.71
Abcf1Q6P542 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Abcf1Q6P542 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Abcf1Q6P542 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.71■■□□□ 1.71
Abcf1Q6P542 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Abcf1Q6P542 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Abcf1Q6P542 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.69■■□□□ 1.7
Abcf1Q6P542 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Abcf1Q6P542 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Abcf1Q6P542 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.69■■□□□ 1.7
Abcf1Q6P542 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Abcf1Q6P542 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Abcf1Q6P542 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Abcf1Q6P542 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Abcf1Q6P542 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Abcf1Q6P542 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Abcf1Q6P542 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Abcf1Q6P542 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Abcf1Q6P542 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Abcf1Q6P542 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Abcf1Q6P542 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
Abcf1Q6P542 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Abcf1Q6P542 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Abcf1Q6P542 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Abcf1Q6P542 Gm8503-201ENSMUST00000118131 455 ntBASIC25.65■■□□□ 1.7
Abcf1Q6P542 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Abcf1Q6P542 Nkain2-201ENSMUST00000092602 558 ntBASIC25.65■■□□□ 1.7
Abcf1Q6P542 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Abcf1Q6P542 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Abcf1Q6P542 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Abcf1Q6P542 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Abcf1Q6P542 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Abcf1Q6P542 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
Abcf1Q6P542 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Abcf1Q6P542 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.63■■□□□ 1.69
Abcf1Q6P542 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Abcf1Q6P542 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Abcf1Q6P542 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.62■■□□□ 1.69
Abcf1Q6P542 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Abcf1Q6P542 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Abcf1Q6P542 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Abcf1Q6P542 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Abcf1Q6P542 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Abcf1Q6P542 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Abcf1Q6P542 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Abcf1Q6P542 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Abcf1Q6P542 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Abcf1Q6P542 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Abcf1Q6P542 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.58■■□□□ 1.69
Abcf1Q6P542 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Abcf1Q6P542 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC25.58■■□□□ 1.69
Abcf1Q6P542 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Abcf1Q6P542 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Abcf1Q6P542 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 276.5 ms