Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga7Q6DD96 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga7Q6DD96 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga7Q6DD96 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga7Q6DD96 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga7Q6DD96 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga7Q6DD96 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga7Q6DD96 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga7Q6DD96 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdhga7Q6DD96 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Pcdhga7Q6DD96 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.47■■□□□ 1.19
Pcdhga7Q6DD96 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga7Q6DD96 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdhga7Q6DD96 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga7Q6DD96 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pcdhga7Q6DD96 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Pcdhga7Q6DD96 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.45■■□□□ 1.18
Pcdhga7Q6DD96 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga7Q6DD96 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga7Q6DD96 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga7Q6DD96 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga7Q6DD96 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga7Q6DD96 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga7Q6DD96 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhga7Q6DD96 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga7Q6DD96 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.42■■□□□ 1.18
Pcdhga7Q6DD96 Particl-201ENSMUST00000205370 1560 ntBASIC22.42■■□□□ 1.18
Pcdhga7Q6DD96 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhga7Q6DD96 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga7Q6DD96 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga7Q6DD96 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhga7Q6DD96 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhga7Q6DD96 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhga7Q6DD96 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhga7Q6DD96 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhga7Q6DD96 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
Pcdhga7Q6DD96 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhga7Q6DD96 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhga7Q6DD96 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhga7Q6DD96 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
Pcdhga7Q6DD96 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhga7Q6DD96 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhga7Q6DD96 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga7Q6DD96 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Pcdhga7Q6DD96 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
Pcdhga7Q6DD96 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhga7Q6DD96 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga7Q6DD96 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhga7Q6DD96 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga7Q6DD96 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga7Q6DD96 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhga7Q6DD96 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhga7Q6DD96 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhga7Q6DD96 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhga7Q6DD96 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhga7Q6DD96 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhga7Q6DD96 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Pcdhga7Q6DD96 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga7Q6DD96 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga7Q6DD96 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
Pcdhga7Q6DD96 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga7Q6DD96 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga7Q6DD96 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga7Q6DD96 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Pcdhga7Q6DD96 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga7Q6DD96 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Pcdhga7Q6DD96 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga7Q6DD96 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga7Q6DD96 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhga7Q6DD96 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga7Q6DD96 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga7Q6DD96 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga7Q6DD96 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Pcdhga7Q6DD96 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga7Q6DD96 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdhga7Q6DD96 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhga7Q6DD96 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.29■■□□□ 1.16
Pcdhga7Q6DD96 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhga7Q6DD96 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhga7Q6DD96 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga7Q6DD96 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga7Q6DD96 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Pcdhga7Q6DD96 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pcdhga7Q6DD96 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.28■■□□□ 1.16
Pcdhga7Q6DD96 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga7Q6DD96 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhga7Q6DD96 Nkain2-201ENSMUST00000092602 558 ntBASIC22.27■■□□□ 1.16
Pcdhga7Q6DD96 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhga7Q6DD96 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga7Q6DD96 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.25■■□□□ 1.15
Pcdhga7Q6DD96 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga7Q6DD96 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga7Q6DD96 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms