Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Commd3Q63829 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Commd3Q63829 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Commd3Q63829 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Commd3Q63829 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Commd3Q63829 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.26■□□□□ 0.67
Commd3Q63829 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Commd3Q63829 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Commd3Q63829 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Commd3Q63829 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Commd3Q63829 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Commd3Q63829 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Commd3Q63829 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Commd3Q63829 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.25■□□□□ 0.67
Commd3Q63829 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Commd3Q63829 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Commd3Q63829 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Commd3Q63829 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Commd3Q63829 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Commd3Q63829 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Commd3Q63829 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Commd3Q63829 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Commd3Q63829 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.22■□□□□ 0.67
Commd3Q63829 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Commd3Q63829 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Commd3Q63829 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.21■□□□□ 0.67
Commd3Q63829 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Commd3Q63829 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Commd3Q63829 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Commd3Q63829 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Commd3Q63829 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.2■□□□□ 0.66
Commd3Q63829 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Commd3Q63829 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.2■□□□□ 0.66
Commd3Q63829 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Commd3Q63829 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Commd3Q63829 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Commd3Q63829 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Commd3Q63829 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Commd3Q63829 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.19■□□□□ 0.66
Commd3Q63829 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.19■□□□□ 0.66
Commd3Q63829 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.19■□□□□ 0.66
Commd3Q63829 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Commd3Q63829 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Commd3Q63829 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Commd3Q63829 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Commd3Q63829 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Commd3Q63829 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Commd3Q63829 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Commd3Q63829 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.18■□□□□ 0.66
Commd3Q63829 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Commd3Q63829 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Commd3Q63829 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Commd3Q63829 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Commd3Q63829 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Commd3Q63829 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Commd3Q63829 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Commd3Q63829 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Commd3Q63829 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Commd3Q63829 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Commd3Q63829 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Commd3Q63829 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Commd3Q63829 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Commd3Q63829 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Commd3Q63829 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.17■□□□□ 0.66
Commd3Q63829 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Commd3Q63829 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Commd3Q63829 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Commd3Q63829 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Commd3Q63829 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Commd3Q63829 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Commd3Q63829 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Commd3Q63829 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Commd3Q63829 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.15■□□□□ 0.66
Commd3Q63829 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Commd3Q63829 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Commd3Q63829 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Commd3Q63829 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Commd3Q63829 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Commd3Q63829 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Commd3Q63829 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Commd3Q63829 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Commd3Q63829 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Commd3Q63829 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Commd3Q63829 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Commd3Q63829 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Commd3Q63829 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Commd3Q63829 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Commd3Q63829 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Commd3Q63829 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Commd3Q63829 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Commd3Q63829 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms