Protein–RNA interactions for Protein: Q61120

Shc3, SHC-transforming protein 3, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc3Q61120 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Shc3Q61120 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Shc3Q61120 Particl-201ENSMUST00000205370 1560 ntBASIC25.14■■□□□ 1.61
Shc3Q61120 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Shc3Q61120 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.12■■□□□ 1.61
Shc3Q61120 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Shc3Q61120 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Shc3Q61120 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Shc3Q61120 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shc3Q61120 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Shc3Q61120 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Shc3Q61120 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Shc3Q61120 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.09■■□□□ 1.61
Shc3Q61120 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.09■■□□□ 1.61
Shc3Q61120 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.09■■□□□ 1.61
Shc3Q61120 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Shc3Q61120 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Shc3Q61120 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Shc3Q61120 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Shc3Q61120 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
Shc3Q61120 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Shc3Q61120 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Shc3Q61120 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Shc3Q61120 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Shc3Q61120 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
Shc3Q61120 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Shc3Q61120 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Shc3Q61120 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shc3Q61120 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Shc3Q61120 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shc3Q61120 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Shc3Q61120 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.03■■□□□ 1.6
Shc3Q61120 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shc3Q61120 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Shc3Q61120 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Shc3Q61120 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
Shc3Q61120 Nkain2-201ENSMUST00000092602 558 ntBASIC25.02■■□□□ 1.6
Shc3Q61120 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Shc3Q61120 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shc3Q61120 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.01■■□□□ 1.59
Shc3Q61120 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.01■■□□□ 1.59
Shc3Q61120 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Shc3Q61120 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Shc3Q61120 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Shc3Q61120 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25■■□□□ 1.59
Shc3Q61120 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Shc3Q61120 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.99■■□□□ 1.59
Shc3Q61120 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Shc3Q61120 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Shc3Q61120 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Shc3Q61120 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Shc3Q61120 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shc3Q61120 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.97■■□□□ 1.59
Shc3Q61120 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shc3Q61120 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Shc3Q61120 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Shc3Q61120 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Shc3Q61120 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.96■■□□□ 1.59
Shc3Q61120 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Shc3Q61120 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Shc3Q61120 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.95■■□□□ 1.58
Shc3Q61120 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Shc3Q61120 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Shc3Q61120 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Shc3Q61120 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Shc3Q61120 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Shc3Q61120 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Shc3Q61120 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.93■■□□□ 1.58
Shc3Q61120 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Shc3Q61120 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Shc3Q61120 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Shc3Q61120 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Shc3Q61120 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Shc3Q61120 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Shc3Q61120 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Shc3Q61120 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Shc3Q61120 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Shc3Q61120 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.88■■□□□ 1.57
Shc3Q61120 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Shc3Q61120 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Shc3Q61120 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shc3Q61120 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Shc3Q61120 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shc3Q61120 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shc3Q61120 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Shc3Q61120 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Shc3Q61120 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Shc3Q61120 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Shc3Q61120 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Shc3Q61120 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Shc3Q61120 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Shc3Q61120 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Shc3Q61120 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Shc3Q61120 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.84■■□□□ 1.57
Shc3Q61120 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Shc3Q61120 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Shc3Q61120 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.83■■□□□ 1.57
Shc3Q61120 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.83■■□□□ 1.57
Shc3Q61120 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Shc3Q61120 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms