Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfaip3Q60769 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnfaip3Q60769 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Tnfaip3Q60769 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Tnfaip3Q60769 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Tnfaip3Q60769 Gm4799-201ENSMUST00000095396 657 ntBASIC21.83■■□□□ 1.09
Tnfaip3Q60769 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.83■■□□□ 1.08
Tnfaip3Q60769 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.83■■□□□ 1.08
Tnfaip3Q60769 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Tnfaip3Q60769 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Tnfaip3Q60769 Gm6311-201ENSMUST00000073790 878 ntBASIC21.82■■□□□ 1.08
Tnfaip3Q60769 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnfaip3Q60769 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tnfaip3Q60769 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.81■■□□□ 1.08
Tnfaip3Q60769 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip3Q60769 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tnfaip3Q60769 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfaip3Q60769 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Tnfaip3Q60769 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfaip3Q60769 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfaip3Q60769 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Tnfaip3Q60769 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.78■■□□□ 1.08
Tnfaip3Q60769 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Tnfaip3Q60769 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip3Q60769 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.77■■□□□ 1.08
Tnfaip3Q60769 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnfaip3Q60769 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfaip3Q60769 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.76■■□□□ 1.07
Tnfaip3Q60769 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.76■■□□□ 1.07
Tnfaip3Q60769 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnfaip3Q60769 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.76■■□□□ 1.07
Tnfaip3Q60769 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfaip3Q60769 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.74■■□□□ 1.07
Tnfaip3Q60769 Mir3960-201ENSMUST00000198213 73 ntBASIC21.74■■□□□ 1.07
Tnfaip3Q60769 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnfaip3Q60769 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.73■■□□□ 1.07
Tnfaip3Q60769 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfaip3Q60769 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnfaip3Q60769 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.73■■□□□ 1.07
Tnfaip3Q60769 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tnfaip3Q60769 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.72■■□□□ 1.07
Tnfaip3Q60769 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.72■■□□□ 1.07
Tnfaip3Q60769 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.72■■□□□ 1.07
Tnfaip3Q60769 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.71■■□□□ 1.07
Tnfaip3Q60769 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfaip3Q60769 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfaip3Q60769 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.7■■□□□ 1.06
Tnfaip3Q60769 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfaip3Q60769 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tnfaip3Q60769 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfaip3Q60769 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfaip3Q60769 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfaip3Q60769 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfaip3Q60769 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.69■■□□□ 1.06
Tnfaip3Q60769 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfaip3Q60769 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfaip3Q60769 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tnfaip3Q60769 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfaip3Q60769 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfaip3Q60769 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tnfaip3Q60769 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.67■■□□□ 1.06
Tnfaip3Q60769 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfaip3Q60769 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
Tnfaip3Q60769 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfaip3Q60769 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfaip3Q60769 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfaip3Q60769 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfaip3Q60769 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfaip3Q60769 Gm45364-201ENSMUST00000210883 159 ntBASIC21.65■■□□□ 1.06
Tnfaip3Q60769 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.65■■□□□ 1.06
Tnfaip3Q60769 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfaip3Q60769 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfaip3Q60769 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfaip3Q60769 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfaip3Q60769 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Tnfaip3Q60769 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfaip3Q60769 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
Tnfaip3Q60769 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.62■■□□□ 1.05
Tnfaip3Q60769 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfaip3Q60769 Gm11175-201ENSMUST00000116172 543 ntBASIC21.62■■□□□ 1.05
Tnfaip3Q60769 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfaip3Q60769 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfaip3Q60769 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfaip3Q60769 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfaip3Q60769 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfaip3Q60769 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
Tnfaip3Q60769 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfaip3Q60769 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfaip3Q60769 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfaip3Q60769 Mir6538-201ENSMUST00000183713 110 ntBASIC21.6■■□□□ 1.05
Tnfaip3Q60769 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfaip3Q60769 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfaip3Q60769 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfaip3Q60769 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Tnfaip3Q60769 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfaip3Q60769 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfaip3Q60769 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfaip3Q60769 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Tnfaip3Q60769 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfaip3Q60769 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms