Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trp53rkaQ5U452 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.2■□□□□ 0.5
Trp53rkaQ5U452 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trp53rkaQ5U452 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trp53rkaQ5U452 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trp53rkaQ5U452 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trp53rkaQ5U452 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trp53rkaQ5U452 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trp53rkaQ5U452 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trp53rkaQ5U452 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trp53rkaQ5U452 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trp53rkaQ5U452 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trp53rkaQ5U452 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trp53rkaQ5U452 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trp53rkaQ5U452 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trp53rkaQ5U452 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trp53rkaQ5U452 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trp53rkaQ5U452 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trp53rkaQ5U452 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trp53rkaQ5U452 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trp53rkaQ5U452 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trp53rkaQ5U452 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trp53rkaQ5U452 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trp53rkaQ5U452 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trp53rkaQ5U452 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trp53rkaQ5U452 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trp53rkaQ5U452 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trp53rkaQ5U452 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Trp53rkaQ5U452 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trp53rkaQ5U452 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trp53rkaQ5U452 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trp53rkaQ5U452 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trp53rkaQ5U452 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trp53rkaQ5U452 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trp53rkaQ5U452 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trp53rkaQ5U452 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trp53rkaQ5U452 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trp53rkaQ5U452 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trp53rkaQ5U452 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trp53rkaQ5U452 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trp53rkaQ5U452 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trp53rkaQ5U452 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trp53rkaQ5U452 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trp53rkaQ5U452 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trp53rkaQ5U452 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trp53rkaQ5U452 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trp53rkaQ5U452 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trp53rkaQ5U452 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trp53rkaQ5U452 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trp53rkaQ5U452 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.1■□□□□ 0.49
Trp53rkaQ5U452 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trp53rkaQ5U452 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.09■□□□□ 0.49
Trp53rkaQ5U452 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.09■□□□□ 0.49
Trp53rkaQ5U452 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Trp53rkaQ5U452 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trp53rkaQ5U452 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trp53rkaQ5U452 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trp53rkaQ5U452 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trp53rkaQ5U452 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trp53rkaQ5U452 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trp53rkaQ5U452 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trp53rkaQ5U452 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trp53rkaQ5U452 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trp53rkaQ5U452 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trp53rkaQ5U452 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trp53rkaQ5U452 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trp53rkaQ5U452 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trp53rkaQ5U452 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trp53rkaQ5U452 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.06■□□□□ 0.48
Trp53rkaQ5U452 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trp53rkaQ5U452 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trp53rkaQ5U452 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.05■□□□□ 0.48
Trp53rkaQ5U452 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trp53rkaQ5U452 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trp53rkaQ5U452 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trp53rkaQ5U452 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trp53rkaQ5U452 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Trp53rkaQ5U452 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trp53rkaQ5U452 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trp53rkaQ5U452 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trp53rkaQ5U452 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trp53rkaQ5U452 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trp53rkaQ5U452 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trp53rkaQ5U452 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trp53rkaQ5U452 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trp53rkaQ5U452 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trp53rkaQ5U452 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trp53rkaQ5U452 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trp53rkaQ5U452 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trp53rkaQ5U452 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms