Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm9910-201ENSMUST00000195385 1550 ntBASIC29.62■■■□□ 2.33
Ubr3Q5U430 Gm22567-201ENSMUST00000175542 342 ntBASIC29.61■■■□□ 2.33
Ubr3Q5U430 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ubr3Q5U430 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC29.61■■■□□ 2.33
Ubr3Q5U430 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
Ubr3Q5U430 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ubr3Q5U430 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Ubr3Q5U430 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Ubr3Q5U430 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Ubr3Q5U430 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Ubr3Q5U430 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ubr3Q5U430 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
Ubr3Q5U430 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Ubr3Q5U430 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC29.57■■■□□ 2.32
Ubr3Q5U430 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ubr3Q5U430 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ubr3Q5U430 Gm10420-201ENSMUST00000121713 882 ntBASIC29.56■■■□□ 2.32
Ubr3Q5U430 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29.56■■■□□ 2.32
Ubr3Q5U430 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ubr3Q5U430 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Ubr3Q5U430 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC29.55■■■□□ 2.32
Ubr3Q5U430 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Ubr3Q5U430 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Ubr3Q5U430 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Ubr3Q5U430 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC29.53■■■□□ 2.32
Ubr3Q5U430 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC29.53■■■□□ 2.32
Ubr3Q5U430 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC29.53■■■□□ 2.32
Ubr3Q5U430 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC29.53■■■□□ 2.32
Ubr3Q5U430 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC29.52■■■□□ 2.32
Ubr3Q5U430 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Ubr3Q5U430 Gm5921-201ENSMUST00000075898 882 ntBASIC29.51■■■□□ 2.31
Ubr3Q5U430 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
Ubr3Q5U430 Gm5067-201ENSMUST00000170449 1009 ntBASIC29.51■■■□□ 2.31
Ubr3Q5U430 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ubr3Q5U430 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ubr3Q5U430 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ubr3Q5U430 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ubr3Q5U430 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ubr3Q5U430 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr3Q5U430 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC29.49■■■□□ 2.31
Ubr3Q5U430 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr3Q5U430 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ubr3Q5U430 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Ubr3Q5U430 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Ubr3Q5U430 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ubr3Q5U430 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC29.46■■■□□ 2.31
Ubr3Q5U430 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ubr3Q5U430 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ubr3Q5U430 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ubr3Q5U430 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
Ubr3Q5U430 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ubr3Q5U430 Gm9812-201ENSMUST00000061934 968 ntBASIC29.42■■■□□ 2.3
Ubr3Q5U430 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ubr3Q5U430 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Ubr3Q5U430 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Ubr3Q5U430 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC29.41■■■□□ 2.3
Ubr3Q5U430 Gm15039-201ENSMUST00000118914 875 ntBASIC29.41■■■□□ 2.3
Ubr3Q5U430 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ubr3Q5U430 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Ubr3Q5U430 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Ubr3Q5U430 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
Ubr3Q5U430 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ubr3Q5U430 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ubr3Q5U430 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ubr3Q5U430 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Ubr3Q5U430 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC29.38■■■□□ 2.29
Ubr3Q5U430 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Ubr3Q5U430 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Ubr3Q5U430 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Ubr3Q5U430 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC29.37■■■□□ 2.29
Ubr3Q5U430 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Ubr3Q5U430 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
Ubr3Q5U430 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ubr3Q5U430 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ubr3Q5U430 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Ubr3Q5U430 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC29.34■■■□□ 2.29
Ubr3Q5U430 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29.34■■■□□ 2.29
Ubr3Q5U430 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Ubr3Q5U430 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Ubr3Q5U430 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.33■■■□□ 2.29
Ubr3Q5U430 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Ubr3Q5U430 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29.32■■■□□ 2.28
Ubr3Q5U430 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Ubr3Q5U430 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Ubr3Q5U430 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Ubr3Q5U430 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Ubr3Q5U430 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
Ubr3Q5U430 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Ubr3Q5U430 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ubr3Q5U430 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
Ubr3Q5U430 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.27■■■□□ 2.28
Ubr3Q5U430 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
Ubr3Q5U430 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ubr3Q5U430 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Ubr3Q5U430 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Ubr3Q5U430 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC29.24■■■□□ 2.27
Ubr3Q5U430 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
Ubr3Q5U430 Gm5522-201ENSMUST00000189483 1242 ntBASIC29.23■■■□□ 2.27
Ubr3Q5U430 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.22■■■□□ 2.27
Ubr3Q5U430 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.22■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms