Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav5d-4Q5R1F6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav5d-4Q5R1F6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav5d-4Q5R1F6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav5d-4Q5R1F6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav5d-4Q5R1F6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav5d-4Q5R1F6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav5d-4Q5R1F6 Particl-201ENSMUST00000205370 1560 ntBASIC19.91■□□□□ 0.78
Trav5d-4Q5R1F6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav5d-4Q5R1F6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav5d-4Q5R1F6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trav5d-4Q5R1F6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.89■□□□□ 0.77
Trav5d-4Q5R1F6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav5d-4Q5R1F6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav5d-4Q5R1F6 Gm6821-201ENSMUST00000107540 542 ntBASIC19.88■□□□□ 0.77
Trav5d-4Q5R1F6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav5d-4Q5R1F6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav5d-4Q5R1F6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav5d-4Q5R1F6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav5d-4Q5R1F6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav5d-4Q5R1F6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav5d-4Q5R1F6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trav5d-4Q5R1F6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav5d-4Q5R1F6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav5d-4Q5R1F6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trav5d-4Q5R1F6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav5d-4Q5R1F6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav5d-4Q5R1F6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav5d-4Q5R1F6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav5d-4Q5R1F6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav5d-4Q5R1F6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav5d-4Q5R1F6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav5d-4Q5R1F6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Trav5d-4Q5R1F6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav5d-4Q5R1F6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav5d-4Q5R1F6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav5d-4Q5R1F6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav5d-4Q5R1F6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.8■□□□□ 0.76
Trav5d-4Q5R1F6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav5d-4Q5R1F6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.8■□□□□ 0.76
Trav5d-4Q5R1F6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav5d-4Q5R1F6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav5d-4Q5R1F6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav5d-4Q5R1F6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5d-4Q5R1F6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trav5d-4Q5R1F6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5d-4Q5R1F6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trav5d-4Q5R1F6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5d-4Q5R1F6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav5d-4Q5R1F6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav5d-4Q5R1F6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav5d-4Q5R1F6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav5d-4Q5R1F6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav5d-4Q5R1F6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav5d-4Q5R1F6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Trav5d-4Q5R1F6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Trav5d-4Q5R1F6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5d-4Q5R1F6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trav5d-4Q5R1F6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5d-4Q5R1F6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5d-4Q5R1F6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5d-4Q5R1F6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav5d-4Q5R1F6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.75■□□□□ 0.75
Trav5d-4Q5R1F6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5d-4Q5R1F6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5d-4Q5R1F6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav5d-4Q5R1F6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav5d-4Q5R1F6 Gm8503-201ENSMUST00000118131 455 ntBASIC19.74■□□□□ 0.75
Trav5d-4Q5R1F6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.74■□□□□ 0.75
Trav5d-4Q5R1F6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trav5d-4Q5R1F6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav5d-4Q5R1F6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Trav5d-4Q5R1F6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.73■□□□□ 0.75
Trav5d-4Q5R1F6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav5d-4Q5R1F6 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.72■□□□□ 0.75
Trav5d-4Q5R1F6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav5d-4Q5R1F6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav5d-4Q5R1F6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav5d-4Q5R1F6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5d-4Q5R1F6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5d-4Q5R1F6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5d-4Q5R1F6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5d-4Q5R1F6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav5d-4Q5R1F6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav5d-4Q5R1F6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav5d-4Q5R1F6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms