Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trav15-1-dv6-1Q5R1D2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Gm24804-201ENSMUST00000174982 85 ntBASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav15-1-dv6-1Q5R1D2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Particl-201ENSMUST00000205370 1560 ntBASIC17.91■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.9■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.9■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Trav15-1-dv6-1Q5R1D2 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.89■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav15-1-dv6-1Q5R1D2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.81■□□□□ 0.44
Trav15-1-dv6-1Q5R1D2 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 156.6 ms