Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
Mdc1Q5PSV9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.62
Mdc1Q5PSV9 Gm14121-201ENSMUST00000121441 1380 ntBASIC31.45■■■□□ 2.62
Mdc1Q5PSV9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Mdc1Q5PSV9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Mdc1Q5PSV9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Mdc1Q5PSV9 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.43■■■□□ 2.62
Mdc1Q5PSV9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Mdc1Q5PSV9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.42■■■□□ 2.62
Mdc1Q5PSV9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.41■■■□□ 2.62
Mdc1Q5PSV9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
Mdc1Q5PSV9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Mdc1Q5PSV9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Mdc1Q5PSV9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Mdc1Q5PSV9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Mdc1Q5PSV9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Mdc1Q5PSV9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Mdc1Q5PSV9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Mdc1Q5PSV9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Mdc1Q5PSV9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC31.39■■■□□ 2.62
Mdc1Q5PSV9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Mdc1Q5PSV9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
Mdc1Q5PSV9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Mdc1Q5PSV9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
Mdc1Q5PSV9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Mdc1Q5PSV9 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.36■■■□□ 2.61
Mdc1Q5PSV9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Mdc1Q5PSV9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Mdc1Q5PSV9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Mdc1Q5PSV9 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.35■■■□□ 2.61
Mdc1Q5PSV9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Mdc1Q5PSV9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Mdc1Q5PSV9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Mdc1Q5PSV9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC31.33■■■□□ 2.61
Mdc1Q5PSV9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Mdc1Q5PSV9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Mdc1Q5PSV9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Mdc1Q5PSV9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Mdc1Q5PSV9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Mdc1Q5PSV9 Gm27502-201ENSMUST00000183495 199 ntBASIC31.31■■■□□ 2.6
Mdc1Q5PSV9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Mdc1Q5PSV9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Mdc1Q5PSV9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC31.29■■■□□ 2.6
Mdc1Q5PSV9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
Mdc1Q5PSV9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Mdc1Q5PSV9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Mdc1Q5PSV9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
Mdc1Q5PSV9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31.28■■■□□ 2.6
Mdc1Q5PSV9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Mdc1Q5PSV9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Mdc1Q5PSV9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.27■■■□□ 2.6
Mdc1Q5PSV9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Mdc1Q5PSV9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.26■■■□□ 2.59
Mdc1Q5PSV9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Mdc1Q5PSV9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Mdc1Q5PSV9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Mdc1Q5PSV9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Mdc1Q5PSV9 Gm16437-201ENSMUST00000025669 507 ntBASIC31.24■■■□□ 2.59
Mdc1Q5PSV9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Mdc1Q5PSV9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Mdc1Q5PSV9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.23■■■□□ 2.59
Mdc1Q5PSV9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.23■■■□□ 2.59
Mdc1Q5PSV9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.23■■■□□ 2.59
Mdc1Q5PSV9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Mdc1Q5PSV9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Mdc1Q5PSV9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Mdc1Q5PSV9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Mdc1Q5PSV9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Mdc1Q5PSV9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC31.18■■■□□ 2.58
Mdc1Q5PSV9 Gm9812-201ENSMUST00000061934 968 ntBASIC31.18■■■□□ 2.58
Mdc1Q5PSV9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Mdc1Q5PSV9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Mdc1Q5PSV9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Mdc1Q5PSV9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Mdc1Q5PSV9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Mdc1Q5PSV9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Mdc1Q5PSV9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Mdc1Q5PSV9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Mdc1Q5PSV9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Mdc1Q5PSV9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Mdc1Q5PSV9 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.15■■■□□ 2.58
Mdc1Q5PSV9 Gm7332-201ENSMUST00000118351 454 ntBASIC31.15■■■□□ 2.58
Mdc1Q5PSV9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Mdc1Q5PSV9 Gm15039-201ENSMUST00000118914 875 ntBASIC31.14■■■□□ 2.58
Mdc1Q5PSV9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Mdc1Q5PSV9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Mdc1Q5PSV9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Mdc1Q5PSV9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.13■■■□□ 2.57
Mdc1Q5PSV9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Mdc1Q5PSV9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Mdc1Q5PSV9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Mdc1Q5PSV9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Mdc1Q5PSV9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Mdc1Q5PSV9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Mdc1Q5PSV9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Mdc1Q5PSV9 AC153911.1-201ENSMUST00000220378 758 ntBASIC31.1■■■□□ 2.57
Mdc1Q5PSV9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.1■■■□□ 2.57
Mdc1Q5PSV9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Mdc1Q5PSV9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Mdc1Q5PSV9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.09■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms