Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
R3hdm4Q4VBF2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
R3hdm4Q4VBF2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
R3hdm4Q4VBF2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
R3hdm4Q4VBF2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
R3hdm4Q4VBF2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
R3hdm4Q4VBF2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
R3hdm4Q4VBF2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.29■■□□□ 1.64
R3hdm4Q4VBF2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.27■■□□□ 1.64
R3hdm4Q4VBF2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
R3hdm4Q4VBF2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
R3hdm4Q4VBF2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
R3hdm4Q4VBF2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
R3hdm4Q4VBF2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
R3hdm4Q4VBF2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
R3hdm4Q4VBF2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.24■■□□□ 1.63
R3hdm4Q4VBF2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
R3hdm4Q4VBF2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
R3hdm4Q4VBF2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
R3hdm4Q4VBF2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
R3hdm4Q4VBF2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
R3hdm4Q4VBF2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
R3hdm4Q4VBF2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.2■■□□□ 1.62
R3hdm4Q4VBF2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
R3hdm4Q4VBF2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
R3hdm4Q4VBF2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
R3hdm4Q4VBF2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
R3hdm4Q4VBF2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
R3hdm4Q4VBF2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
R3hdm4Q4VBF2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
R3hdm4Q4VBF2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
R3hdm4Q4VBF2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.12■■□□□ 1.61
R3hdm4Q4VBF2 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.11■■□□□ 1.61
R3hdm4Q4VBF2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
R3hdm4Q4VBF2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
R3hdm4Q4VBF2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
R3hdm4Q4VBF2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
R3hdm4Q4VBF2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.08■■□□□ 1.61
R3hdm4Q4VBF2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
R3hdm4Q4VBF2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
R3hdm4Q4VBF2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
R3hdm4Q4VBF2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
R3hdm4Q4VBF2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Gm4799-201ENSMUST00000095396 657 ntBASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
R3hdm4Q4VBF2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
R3hdm4Q4VBF2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.02■■□□□ 1.6
R3hdm4Q4VBF2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
R3hdm4Q4VBF2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
R3hdm4Q4VBF2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
R3hdm4Q4VBF2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
R3hdm4Q4VBF2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
R3hdm4Q4VBF2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25■■□□□ 1.59
R3hdm4Q4VBF2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
R3hdm4Q4VBF2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
R3hdm4Q4VBF2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.97■■□□□ 1.59
R3hdm4Q4VBF2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
R3hdm4Q4VBF2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.95■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms