Protein–RNA interactions for Protein: P56916

Gsc2, Homeobox protein goosecoid-2, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gsc2P56916 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gsc2P56916 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gsc2P56916 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Gsc2P56916 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gsc2P56916 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.43■□□□□ 0.7
Gsc2P56916 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gsc2P56916 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gsc2P56916 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gsc2P56916 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gsc2P56916 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Gsc2P56916 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gsc2P56916 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gsc2P56916 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gsc2P56916 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gsc2P56916 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.41■□□□□ 0.7
Gsc2P56916 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gsc2P56916 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gsc2P56916 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gsc2P56916 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Gsc2P56916 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gsc2P56916 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gsc2P56916 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gsc2P56916 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.41■□□□□ 0.7
Gsc2P56916 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gsc2P56916 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gsc2P56916 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gsc2P56916 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gsc2P56916 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gsc2P56916 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gsc2P56916 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gsc2P56916 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.39■□□□□ 0.69
Gsc2P56916 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gsc2P56916 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gsc2P56916 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gsc2P56916 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gsc2P56916 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gsc2P56916 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gsc2P56916 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gsc2P56916 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gsc2P56916 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gsc2P56916 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Gsc2P56916 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gsc2P56916 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gsc2P56916 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gsc2P56916 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gsc2P56916 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Gsc2P56916 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Gsc2P56916 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.35■□□□□ 0.69
Gsc2P56916 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gsc2P56916 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gsc2P56916 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Gsc2P56916 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gsc2P56916 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gsc2P56916 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gsc2P56916 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gsc2P56916 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gsc2P56916 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gsc2P56916 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gsc2P56916 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gsc2P56916 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gsc2P56916 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gsc2P56916 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gsc2P56916 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gsc2P56916 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gsc2P56916 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gsc2P56916 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gsc2P56916 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gsc2P56916 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gsc2P56916 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gsc2P56916 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gsc2P56916 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gsc2P56916 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Gsc2P56916 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.3■□□□□ 0.68
Gsc2P56916 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gsc2P56916 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gsc2P56916 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gsc2P56916 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gsc2P56916 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gsc2P56916 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gsc2P56916 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.29■□□□□ 0.68
Gsc2P56916 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gsc2P56916 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.28■□□□□ 0.68
Gsc2P56916 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gsc2P56916 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gsc2P56916 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gsc2P56916 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gsc2P56916 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gsc2P56916 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gsc2P56916 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gsc2P56916 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.26■□□□□ 0.67
Gsc2P56916 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gsc2P56916 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gsc2P56916 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gsc2P56916 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gsc2P56916 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gsc2P56916 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.25■□□□□ 0.67
Gsc2P56916 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gsc2P56916 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Gsc2P56916 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gsc2P56916 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms