Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sox18P43680 Gm10420-201ENSMUST00000121713 882 ntBASIC22.51■■□□□ 1.19
Sox18P43680 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Sox18P43680 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox18P43680 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sox18P43680 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox18P43680 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sox18P43680 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Sox18P43680 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sox18P43680 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Sox18P43680 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Sox18P43680 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.48■■□□□ 1.19
Sox18P43680 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sox18P43680 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.47■■□□□ 1.19
Sox18P43680 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sox18P43680 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.46■■□□□ 1.19
Sox18P43680 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.46■■□□□ 1.19
Sox18P43680 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sox18P43680 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sox18P43680 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sox18P43680 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.45■■□□□ 1.18
Sox18P43680 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sox18P43680 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Sox18P43680 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox18P43680 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.43■■□□□ 1.18
Sox18P43680 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sox18P43680 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox18P43680 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox18P43680 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.43■■□□□ 1.18
Sox18P43680 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sox18P43680 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Sox18P43680 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sox18P43680 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sox18P43680 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Sox18P43680 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Sox18P43680 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Sox18P43680 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.4■■□□□ 1.18
Sox18P43680 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sox18P43680 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sox18P43680 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.39■■□□□ 1.18
Sox18P43680 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Sox18P43680 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.39■■□□□ 1.17
Sox18P43680 Gm37136-201ENSMUST00000194368 194 ntBASIC22.39■■□□□ 1.17
Sox18P43680 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sox18P43680 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sox18P43680 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.38■■□□□ 1.17
Sox18P43680 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sox18P43680 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sox18P43680 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sox18P43680 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.38■■□□□ 1.17
Sox18P43680 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sox18P43680 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sox18P43680 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.37■■□□□ 1.17
Sox18P43680 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sox18P43680 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.37■■□□□ 1.17
Sox18P43680 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sox18P43680 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Sox18P43680 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sox18P43680 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Sox18P43680 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sox18P43680 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.36■■□□□ 1.17
Sox18P43680 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.36■■□□□ 1.17
Sox18P43680 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.36■■□□□ 1.17
Sox18P43680 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.35■■□□□ 1.17
Sox18P43680 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sox18P43680 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.34■■□□□ 1.17
Sox18P43680 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sox18P43680 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox18P43680 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sox18P43680 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Sox18P43680 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox18P43680 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sox18P43680 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.31■■□□□ 1.16
Sox18P43680 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.31■■□□□ 1.16
Sox18P43680 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sox18P43680 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sox18P43680 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sox18P43680 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.3■■□□□ 1.16
Sox18P43680 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sox18P43680 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Sox18P43680 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.29■■□□□ 1.16
Sox18P43680 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sox18P43680 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sox18P43680 Rps24-207ENSMUST00000224568 714 ntBASIC22.29■■□□□ 1.16
Sox18P43680 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Sox18P43680 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Sox18P43680 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Sox18P43680 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.28■■□□□ 1.16
Sox18P43680 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sox18P43680 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sox18P43680 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.27■■□□□ 1.16
Sox18P43680 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sox18P43680 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sox18P43680 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.26■■□□□ 1.15
Sox18P43680 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sox18P43680 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sox18P43680 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sox18P43680 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.24■■□□□ 1.15
Sox18P43680 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.24■■□□□ 1.15
Sox18P43680 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms