Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd27P41272 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cd27P41272 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.8■□□□□ 0.6
Cd27P41272 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd27P41272 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd27P41272 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd27P41272 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cd27P41272 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd27P41272 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd27P41272 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd27P41272 Gm37136-201ENSMUST00000194368 194 ntBASIC18.78■□□□□ 0.6
Cd27P41272 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd27P41272 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.77■□□□□ 0.6
Cd27P41272 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cd27P41272 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd27P41272 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd27P41272 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd27P41272 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Cd27P41272 Gm7432-201ENSMUST00000210343 879 ntBASIC18.75■□□□□ 0.59
Cd27P41272 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd27P41272 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cd27P41272 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cd27P41272 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd27P41272 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd27P41272 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd27P41272 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.74■□□□□ 0.59
Cd27P41272 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.74■□□□□ 0.59
Cd27P41272 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd27P41272 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cd27P41272 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cd27P41272 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd27P41272 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd27P41272 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd27P41272 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.72■□□□□ 0.59
Cd27P41272 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cd27P41272 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd27P41272 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd27P41272 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd27P41272 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd27P41272 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Cd27P41272 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cd27P41272 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cd27P41272 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd27P41272 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.7■□□□□ 0.58
Cd27P41272 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cd27P41272 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd27P41272 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cd27P41272 Gm11599-201ENSMUST00000118720 878 ntBASIC18.68■□□□□ 0.58
Cd27P41272 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cd27P41272 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.68■□□□□ 0.58
Cd27P41272 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Cd27P41272 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd27P41272 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd27P41272 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cd27P41272 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.66■□□□□ 0.58
Cd27P41272 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.66■□□□□ 0.58
Cd27P41272 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cd27P41272 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cd27P41272 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd27P41272 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd27P41272 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd27P41272 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd27P41272 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd27P41272 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd27P41272 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd27P41272 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd27P41272 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cd27P41272 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd27P41272 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cd27P41272 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cd27P41272 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cd27P41272 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cd27P41272 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd27P41272 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd27P41272 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd27P41272 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd27P41272 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cd27P41272 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cd27P41272 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd27P41272 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cd27P41272 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Cd27P41272 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd27P41272 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cd27P41272 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cd27P41272 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd27P41272 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd27P41272 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cd27P41272 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Cd27P41272 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cd27P41272 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd27P41272 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd27P41272 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd27P41272 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms