Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PtcraP0C6B2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PtcraP0C6B2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PtcraP0C6B2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PtcraP0C6B2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PtcraP0C6B2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PtcraP0C6B2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PtcraP0C6B2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PtcraP0C6B2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PtcraP0C6B2 Gm7432-201ENSMUST00000210343 879 ntBASIC20.21■□□□□ 0.83
PtcraP0C6B2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PtcraP0C6B2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PtcraP0C6B2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PtcraP0C6B2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.2■□□□□ 0.82
PtcraP0C6B2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PtcraP0C6B2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PtcraP0C6B2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PtcraP0C6B2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PtcraP0C6B2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
PtcraP0C6B2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PtcraP0C6B2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
PtcraP0C6B2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PtcraP0C6B2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PtcraP0C6B2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PtcraP0C6B2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PtcraP0C6B2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PtcraP0C6B2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PtcraP0C6B2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PtcraP0C6B2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PtcraP0C6B2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.16■□□□□ 0.82
PtcraP0C6B2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
PtcraP0C6B2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PtcraP0C6B2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PtcraP0C6B2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PtcraP0C6B2 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.15■□□□□ 0.82
PtcraP0C6B2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PtcraP0C6B2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PtcraP0C6B2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PtcraP0C6B2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PtcraP0C6B2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PtcraP0C6B2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PtcraP0C6B2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PtcraP0C6B2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PtcraP0C6B2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PtcraP0C6B2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PtcraP0C6B2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PtcraP0C6B2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PtcraP0C6B2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PtcraP0C6B2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
PtcraP0C6B2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.12■□□□□ 0.81
PtcraP0C6B2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PtcraP0C6B2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PtcraP0C6B2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PtcraP0C6B2 Gm11599-201ENSMUST00000118720 878 ntBASIC20.11■□□□□ 0.81
PtcraP0C6B2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PtcraP0C6B2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PtcraP0C6B2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PtcraP0C6B2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PtcraP0C6B2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PtcraP0C6B2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.09■□□□□ 0.81
PtcraP0C6B2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PtcraP0C6B2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PtcraP0C6B2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PtcraP0C6B2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PtcraP0C6B2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PtcraP0C6B2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PtcraP0C6B2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PtcraP0C6B2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PtcraP0C6B2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PtcraP0C6B2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PtcraP0C6B2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PtcraP0C6B2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PtcraP0C6B2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PtcraP0C6B2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PtcraP0C6B2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.06■□□□□ 0.8
PtcraP0C6B2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtcraP0C6B2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PtcraP0C6B2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PtcraP0C6B2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtcraP0C6B2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtcraP0C6B2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PtcraP0C6B2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtcraP0C6B2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PtcraP0C6B2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PtcraP0C6B2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PtcraP0C6B2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtcraP0C6B2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PtcraP0C6B2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PtcraP0C6B2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PtcraP0C6B2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PtcraP0C6B2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PtcraP0C6B2 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.01■□□□□ 0.79
PtcraP0C6B2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PtcraP0C6B2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20■□□□□ 0.79
PtcraP0C6B2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20■□□□□ 0.79
PtcraP0C6B2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PtcraP0C6B2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PtcraP0C6B2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PtcraP0C6B2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PtcraP0C6B2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms